WormBase Tree Display for Variation: WBVar00053612
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WBVar00053612 | Evidence | Paper_evidence | WBPaper00005369 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar00053612 | ||||
Other_name (12) | ||||||
HGVSg | CHROMOSOME_V:g.8788017G>A | |||||
Sequence_details | SMap | S_parent | Sequence | C01B7 | ||
Flanking_sequences | actgcaattgtaaatcatcacaaagaaaaagagaagcaaacggctcaagctactgcagactttctcaagcttctcgattttactggaattaatggagaaattggtgaacataaagcacaaagttcttccacaagaagctccagtggcagaaaacgtccctatgtgcccacatctgccaccgaagccataacaactatggaattggctgctccgagtgcggaatcgtttttggccagcttgaactctttca | ccatgcccagacacctgaaaatgaggaaaatgatcaccgtgagttttcaaaaattgaagtttcaaagtttcgctagttgattactttcttgaaaattacatgacggtttttgaaaaaaaaacaacaaaaaactcgcatcttgcttcgagaatttccaaattaaagatttttgttagttgcagctacattgttctctgtcgacgatctcaacattgacagcacttccacactcgcaacgcttttcggtgga | ||||
Mapping_target | C01B7 | |||||
Type_of_mutation | Substitution | g | a | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Confirmed_SNP | ||||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00004602 | From_analysis | SNP_Swan | |||
Analysis | SNP_Swan | |||||
Status | Live | |||||
Affects | Gene | WBGene00006342 | ||||
Transcript | C01B7.1d.1 (12) | |||||
C01B7.1b.1 (12) | ||||||
C01B7.1a.1 (12) | ||||||
C01B7.1c.1 (12) | ||||||
C01B7.1c.2 (12) | ||||||
C01B7.1b.2 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | |||||
SIFT | 0.41 | tolerated | ||||
PolyPhen | 0 | benign | ||||
HGVSc | C01B7.1b.2:c.950G>A | |||||
HGVSp | CE30719:p.Ser317Asn | |||||
cDNA_position | 962 | |||||
CDS_position | 950 | |||||
Protein_position | 317 | |||||
Exon_number | 3/7 | |||||
Codon_change | aGc/aAc | |||||
Amino_acid_change | S/N | |||||
C01B7.1a.2 (12) | ||||||
Reference | WBPaper00005369 | |||||
Method | SNP_Swan |