WormBase Tree Display for Transcript: H27A22.1b.1
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| H27A22.1b.1 | SMap | S_parent | Sequence | CHROMOSOME_V | |
|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 6 | ||
| 1539 | 1793 | ||||
| 1848 | 2200 | ||||
| 2251 | 2338 | ||||
| 2384 | 2597 | ||||
| 2684 | 3026 | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Visible | Gene | WBGene00010418 | |||
| Variation (49) | |||||
| Matching_cDNA | L1_Nanopore_Roach_37928 | Inferred_automatically | transcript_builder.pl | ||
| yk479b11.5 | Inferred_automatically | transcript_builder.pl | |||
| male_Nanopore_Roach_43344 | Inferred_automatically | transcript_builder.pl | |||
| L2_Nanopore_Roach_38773 | Inferred_automatically | transcript_builder.pl | |||
| Corresponding_CDS | H27A22.1b | ||||
| Corresponding_PCR_product | cenix:37-g11 | ||||
| mv_H27A22.1 | |||||
| sjj_H27A22.1 | |||||
| Corresponding_oligo_set (19) | |||||
| RNAi_result | WBRNAi00024056 | ||||
| WBRNAi00023258 | |||||
| WBRNAi00016324 | |||||
| WBRNAi00023770 | |||||
| WBRNAi00023511 | |||||
| WBRNAi00089101 | |||||
| WBRNAi00033756 | |||||
| WBRNAi00049499 | |||||
| Microarray_results (24) | |||||
| SAGE_tag | SAGE:gggtcaatgg | Strand | Sense | ||
| Unambiguously_mapped | |||||
| SAGE:ctattggatctactcgg | Strand | Sense | |||
| Unambiguously_mapped | |||||
| SAGE:ctattggatc | Strand | Sense | |||
| Unambiguously_mapped | |||||
| SAGE:tcactacgattcgaaaa | Strand | Sense | |||
| Unambiguously_mapped | |||||
| SAGE:agaacgtcaa | Strand | Antisense | |||
| SAGE:gggtcaatggagaacaa | Strand | Sense | |||
| Unambiguously_mapped | |||||
| RNASeq_FPKM (74) | |||||
| Properties | Transcript | mRNA | |||
| Method | Coding_transcript |
