WormBase Tree Display for Transcript: C27D6.1.1
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| C27D6.1.1 | SMap | S_parent | Sequence | C27D6 | |
|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 55 | ||
| 100 | 197 | ||||
| 247 | 327 | ||||
| 376 | 879 | ||||
| 2920 | 3024 | ||||
| 3079 | 3609 | ||||
| 3656 | 3775 | ||||
| 3830 | 3952 | ||||
| 3996 | 4109 | ||||
| 4325 | 4690 | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Visible | Gene | WBGene00016160 | |||
| Variation (78) | |||||
| Matching_cDNA | EM_Nanopore_Li_846 | Inferred_automatically | transcript_builder.pl | ||
| EM_Nanopore_Li_51339 | Inferred_automatically | transcript_builder.pl | |||
| RST3_519653 | Inferred_automatically | transcript_builder.pl | |||
| Corresponding_CDS | C27D6.1 | ||||
| Corresponding_PCR_product | cenix:68-h5 | ||||
| mv_C27D6.1 | |||||
| mv_C27D6.4 | |||||
| sjj_C27D6.1 | |||||
| sjj_C27D6.3 | |||||
| Corresponding_oligo_set (19) | |||||
| RNAi_result | WBRNAi00008448 | ||||
| WBRNAi00041342 | |||||
| WBRNAi00011254 | |||||
| Microarray_results (20) | |||||
| SAGE_tag | SAGE:aagaaattgg | Strand | Sense | ||
| Unambiguously_mapped | |||||
| SAGE:ttgaattgacttagact | Strand | Antisense | |||
| SAGE:atgtcactctactaaac | Strand | Sense | |||
| Unambiguously_mapped | |||||
| SAGE:ttgaattgac | Strand | Antisense | |||
| SAGE:aaaaaagttc | Strand | Sense | |||
| Unambiguously_mapped | |||||
| SAGE:tttccaccttgatggat | Strand | Sense | |||
| Unambiguously_mapped | |||||
| SAGE:atcttcttcg | Strand | Antisense | |||
| SAGE:aaaaaagttccaccgat | Strand | Sense | |||
| Unambiguously_mapped | |||||
| SAGE:aaaatcgtat | Strand | Sense | |||
| Unambiguously_mapped | |||||
| RNASeq_FPKM (74) | |||||
| Properties | Transcript | mRNA | |||
| Associated_feature | WBsf979633 | ||||
| Method | Coding_transcript |
