WormBase Tree Display for Transcript: T05G5.7a.1
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| T05G5.7a.1 | SMap | S_parent | Sequence | T05G5 | |
|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 60 | ||
| 451 | 879 | ||||
| 937 | 1296 | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Visible | Gene | WBGene00011501 | |||
| Variation (13) | |||||
| Matching_cDNA | EC018315 | Inferred_automatically | transcript_builder.pl | ||
| yk619e3.5 | Inferred_automatically | transcript_builder.pl | |||
| EC031039 | Inferred_automatically | transcript_builder.pl | |||
| EC003170 | Inferred_automatically | transcript_builder.pl | |||
| CK583295 | Inferred_automatically | transcript_builder.pl | |||
| EC007995 | Inferred_automatically | transcript_builder.pl | |||
| yk383g2.3 | Inferred_automatically | transcript_builder.pl | |||
| EC003063 | Inferred_automatically | transcript_builder.pl | |||
| EM_Nanopore_Li_105479 | Inferred_automatically | transcript_builder.pl | |||
| yk174c10.5 | Inferred_automatically | transcript_builder.pl | |||
| YA_Nanopore_Li_180803 | Inferred_automatically | transcript_builder.pl | |||
| yk383g2.5 | Inferred_automatically | transcript_builder.pl | |||
| YA_Nanopore_Li_349914 | Inferred_automatically | transcript_builder.pl | |||
| EB995004 | Inferred_automatically | transcript_builder.pl | |||
| EC016878 | Inferred_automatically | transcript_builder.pl | |||
| male_Nanopore_Roach_104700 | Inferred_automatically | transcript_builder.pl | |||
| YA_Nanopore_Li_287663 | Inferred_automatically | transcript_builder.pl | |||
| yk493d5.3 | Inferred_automatically | transcript_builder.pl | |||
| OSTR056E2_1 | Inferred_automatically | transcript_builder.pl | |||
| yk507f10.5 | Inferred_automatically | transcript_builder.pl | |||
| YA_Nanopore_Li_118421 | Inferred_automatically | transcript_builder.pl | |||
| EC037905 | Inferred_automatically | transcript_builder.pl | |||
| yk367b2.3 | Inferred_automatically | transcript_builder.pl | |||
| EC015906 | Inferred_automatically | transcript_builder.pl | |||
| EC025303 | Inferred_automatically | transcript_builder.pl | |||
| EM_Nanopore_Li_316118 | Inferred_automatically | transcript_builder.pl | |||
| EC036152 | Inferred_automatically | transcript_builder.pl | |||
| EC033958 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Roach_64543 | Inferred_automatically | transcript_builder.pl | |||
| yk428g3.3 | Inferred_automatically | transcript_builder.pl | |||
| EC020014 | Inferred_automatically | transcript_builder.pl | |||
| EC011205 | Inferred_automatically | transcript_builder.pl | |||
| adult_Nanopore_Roach_67017 | Inferred_automatically | transcript_builder.pl | |||
| EC033804 | Inferred_automatically | transcript_builder.pl | |||
| EC030305 | Inferred_automatically | transcript_builder.pl | |||
| yk642g5.3 | Inferred_automatically | transcript_builder.pl | |||
| EC012922 | Inferred_automatically | transcript_builder.pl | |||
| EC013176 | Inferred_automatically | transcript_builder.pl | |||
| EB995012 | Inferred_automatically | transcript_builder.pl | |||
| L3_Nanopore_Roach_61786 | Inferred_automatically | transcript_builder.pl | |||
| EB994323 | Inferred_automatically | transcript_builder.pl | |||
| yk563d1.3 | Inferred_automatically | transcript_builder.pl | |||
| EC030955 | Inferred_automatically | transcript_builder.pl | |||
| EM_Nanopore_Li_60813 | Inferred_automatically | transcript_builder.pl | |||
| EB998373 | Inferred_automatically | transcript_builder.pl | |||
| EC029808 | Inferred_automatically | transcript_builder.pl | |||
| yk642g5.5 | Inferred_automatically | transcript_builder.pl | |||
| YA_Nanopore_Li_149193 | Inferred_automatically | transcript_builder.pl | |||
| yk620a5.3 | Inferred_automatically | transcript_builder.pl | |||
| young_adult_Nanopore_Roach_82247 | Inferred_automatically | transcript_builder.pl | |||
| yk475a8.3 | Inferred_automatically | transcript_builder.pl | |||
| EC003808 | Inferred_automatically | transcript_builder.pl | |||
| young_adult_Nanopore_Roach_99456 | Inferred_automatically | transcript_builder.pl | |||
| CK575924 | Inferred_automatically | transcript_builder.pl | |||
| elegans_PE_SS_GG6697|c3_g1_i1 | Inferred_automatically | transcript_builder.pl | |||
| adult_Nanopore_Roach_81558 | Inferred_automatically | transcript_builder.pl | |||
| EC027160 | Inferred_automatically | transcript_builder.pl | |||
| EC004047 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Li_262652 | Inferred_automatically | transcript_builder.pl | |||
| EC012429 | Inferred_automatically | transcript_builder.pl | |||
| EC014834 | Inferred_automatically | transcript_builder.pl | |||
| EC023946 | Inferred_automatically | transcript_builder.pl | |||
| EC017828 | Inferred_automatically | transcript_builder.pl | |||
| EC014418 | Inferred_automatically | transcript_builder.pl | |||
| EC015752 | Inferred_automatically | transcript_builder.pl | |||
| EC016746 | Inferred_automatically | transcript_builder.pl | |||
| EC003819 | Inferred_automatically | transcript_builder.pl | |||
| EC008855 | Inferred_automatically | transcript_builder.pl | |||
| EC016794 | Inferred_automatically | transcript_builder.pl | |||
| EC026246 | Inferred_automatically | transcript_builder.pl | |||
| EM_Nanopore_Li_140820 | Inferred_automatically | transcript_builder.pl | |||
| YA_Nanopore_Li_316646 | Inferred_automatically | transcript_builder.pl | |||
| yk475a8.5 | Inferred_automatically | transcript_builder.pl | |||
| EC025315 | Inferred_automatically | transcript_builder.pl | |||
| EC023690 | Inferred_automatically | transcript_builder.pl | |||
| EB998248 | Inferred_automatically | transcript_builder.pl | |||
| EC021316 | Inferred_automatically | transcript_builder.pl | |||
| EC028418 | Inferred_automatically | transcript_builder.pl | |||
| EC038982 | Inferred_automatically | transcript_builder.pl | |||
| adult_Nanopore_Roach_90673 | Inferred_automatically | transcript_builder.pl | |||
| EM_Nanopore_Li_301250 | Inferred_automatically | transcript_builder.pl | |||
| young_adult_Nanopore_Roach_83027 | Inferred_automatically | transcript_builder.pl | |||
| EC007735 | Inferred_automatically | transcript_builder.pl | |||
| EB997032 | Inferred_automatically | transcript_builder.pl | |||
| EC030831 | Inferred_automatically | transcript_builder.pl | |||
| L4_Nanopore_Roach_42060 | Inferred_automatically | transcript_builder.pl | |||
| EC032292 | Inferred_automatically | transcript_builder.pl | |||
| EC031013 | Inferred_automatically | transcript_builder.pl | |||
| EC034183 | Inferred_automatically | transcript_builder.pl | |||
| EC035553 | Inferred_automatically | transcript_builder.pl | |||
| EC028524 | Inferred_automatically | transcript_builder.pl | |||
| Corresponding_CDS | T05G5.7a | ||||
| Corresponding_PCR_product | TH:321d3 | ||||
| TH:340b8 | |||||
| cenix:176-b7 | |||||
| cenix:321-d3 | |||||
| cenix:340-b8 | |||||
| mv_T05G5.7 | |||||
| mv_T05G5.9 | |||||
| sjj_T05G5.7 | |||||
| Corresponding_oligo_set (22) | |||||
| RNAi_result (12) | |||||
| Microarray_results | SMD_T05G5.7 | ||||
| 186975_at | |||||
| A_12_P113964 | |||||
| A_12_P169748 | |||||
| A_12_P169749 | |||||
| A_12_P169750 | |||||
| A_12_P169751 | |||||
| Aff_T05G5.7 | |||||
| GPL13394_WBGene00011501 | |||||
| GPL13914_T05G5.7 | |||||
| GPL14144_T05G5.7_224-283_0.907_16_B | |||||
| GPL14144_T05G5.7_487-546_0.877_21_C | |||||
| GPL14144_T05G5.7_769-828_0.960_1_A | |||||
| GPL19516_CGZ0033492 | |||||
| GPL19516_CGZ0033493 | |||||
| GPL19516_CGZ0033494 | |||||
| GPL21109_T05G5.7a | |||||
| GPL3518_CE00319 | |||||
| GPL8304_CE_WBGene00011501_A | |||||
| GPL8304_CE_WBGene00011501_B | |||||
| GPL8304_CE_WBGene00011501_C | |||||
| GPL8673_T05G5_7P00353 | |||||
| GPL8673_T05G5_7P00781 | |||||
| GPL9450_T05G5.7 | |||||
| cea2.p.72635 | |||||
| RNASeq_FPKM (74) | |||||
| Properties | Transcript | mRNA | |||
| Associated_feature | WBsf175518 | ||||
| WBsf126335 | |||||
| Method | Coding_transcript |
