WormBase Tree Display for Sequence: young_adult_Nanopore_Roach_29137
expand all nodes | collapse all nodes | view schema
| young_adult_Nanopore_Roach_29137 | DNA | young_adult_Nanopore_Roach_29137 | 1617 | ||
|---|---|---|---|---|---|
| DB_info | Database | WormBase | |||
| Origin | Life_stage | WBls:0000063 | |||
| Species | Caenorhabditis elegans | ||||
| Read_coverage | 10 | ||||
| Visible | Title | The full-length transcriptome of C. elegans using direct RNA sequencing for life_stage young_adult. From Roach, Sadowski et al. (2019) | |||
| Matching_CDS | H23N18.1 | Inferred_automatically | transcript_builder.pl | ||
| Matching_transcript | H23N18.1.1 | Inferred_automatically | transcript_builder.pl | ||
| Remark | There are 10 entries comprising this consensus structure | ||||
| The cluster of 5' starts (90% : 9 of 10) has been used in this consensus. The 3' end is the median of a cluster of (50% : 5 of 10) ends. | |||||
| Properties | cDNA | cDNA_EST | |||
| EST_5 | |||||
| Homol | Homol_homol | BLAT_Nanopore:CHROMOSOME_V_33 | |||
| BLAT_Nanopore:SRAE_chr2_17 | |||||
| BLAT_Nanopore:SRAE_chr2_21 | |||||
| BLAT_Nanopore:SRAE_chr2_71 | |||||
| BLAT_Nanopore:SRAE_chr2_94 | |||||
| BLAT_Nanopore:SRAE_chr2_101 | |||||
| BLAT_Nanopore:SRAE_chrX_scaffold1_21 | |||||
| BLAT_Nanopore:SRAE_scaffold1_5 | |||||
| Method | Nanopore |
