WormBase Tree Display for Sequence: male_Nanopore_Roach_29083
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| male_Nanopore_Roach_29083 | DNA | male_Nanopore_Roach_29083 | 1618 | ||
|---|---|---|---|---|---|
| DB_info | Database | WormBase | |||
| Origin | Life_stage | WBls:0000056 | |||
| Species | Caenorhabditis elegans | ||||
| Read_coverage | 8 | ||||
| Visible | Title | The full-length transcriptome of C. elegans using direct RNA sequencing for life_stage male. From Roach, Sadowski et al. (2019) | |||
| Matching_CDS | H23N18.1 | Inferred_automatically | transcript_builder.pl | ||
| Matching_transcript | H23N18.1.1 | Inferred_automatically | transcript_builder.pl | ||
| Remark | There are 8 entries comprising this consensus structure | ||||
| The cluster of 5' starts (87% : 7 of 8) has been used in this consensus. The 3' end is the median of a cluster of (37% : 3 of 8) ends. | |||||
| Properties | cDNA | cDNA_EST | |||
| EST_5 | |||||
| Homol | Homol_homol | BLAT_Nanopore:CHROMOSOME_V_33 | |||
| BLAT_Nanopore:SRAE_chr2_17 | |||||
| BLAT_Nanopore:SRAE_chr2_21 | |||||
| BLAT_Nanopore:SRAE_chr2_71 | |||||
| BLAT_Nanopore:SRAE_chr2_94 | |||||
| BLAT_Nanopore:SRAE_chr2_101 | |||||
| BLAT_Nanopore:SRAE_chrX_scaffold1_21 | |||||
| BLAT_Nanopore:SRAE_scaffold1_5 | |||||
| Method | Nanopore |
