WormBase Tree Display for Sequence: T22A3
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| T22A3 | DNA | T22A3 | 36051 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child (16) | ||||
| CDS_child (317) | ||||||
| Transcript (23) | ||||||
| Nongenomic | yk307b7 | 690 | 1325 | |||
| PCR_product (22) | ||||||
| Allele (377) | ||||||
| Oligo_set | Aff_T22A3.2 | 3043 | 2125 | |||
| Aff_T22A3.3 | 9657 | 10515 | ||||
| Aff_T22A3.4 | 12983 | 14275 | ||||
| Aff_T22A3.5 | 25789 | 26783 | ||||
| Aff_T22A3.6 | 17771 | 18527 | ||||
| Feature_object (396) | ||||||
| Feature_data | T22A3:Polysome | 1 | 36051 | |||
| T22A3:TranscriptionallyActiveRegion | 1 | 36051 | ||||
| T22A3:ChIPSeqTF | 1 | 36051 | ||||
| T22A3:TRF | 1 | 36051 | ||||
| T22A3:Dust | 1 | 36051 | ||||
| T22A3:inverted | 1 | 36051 | ||||
| Homol_data (18) | ||||||
| Structure | From | Source | CHROMOSOME_I | |||
| Overlap_right | H10E24 | 35948 | ||||
| Overlap_left | F29C6 | |||||
| Clone_left_end | T22A3 | 1 | ||||
| Clone_right_end | F29C6 | 19680 | ||||
| T22A3 | 36051 | |||||
| DB_info | Database | EMBL | NDB_AC | Z81125 | ||
| NDB_SV | Z81125.2 | |||||
| DB_remark | A join has been made in the tandem repeat region (bases 23470 - 25210) and is not confirmed by any other reads. However, the size of the cosmid has been confirmed by restriction digest. | |||||
| [121025] Sequence correction: SNP 0 bases @ 16414 | ||||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | McMurray AA | ||||
| From_laboratory | HX | |||||
| Date_directory | 960924 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | T22A3 | ||||
| Remark | 980618:sjj: T22A3.5 and T22A3.7 were merged into T22A3.5 due to EST data | |||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 09457bdeae35728bb694e14b5302bf7b | ||||
| Status | Finished | 24 Sep 1996 00:00:00 | ||||
| Submitted | 21 Oct 1996 00:00:00 | |||||
| Annotated | 06 Jan 1997 00:00:00 | |||||
| Map | Sequence-I | Ends | Left | 5210 | ||
| Right | 5226 | |||||
| Interpolated_map_position | I | 5.05785 | ||||
| Assembly_tags | Finished Left | 1 | 4 | T22A3 | ||
| Clone left end | 1 | 4 | T22A3 | |||
| annotation | 14549 | 14549 | uncertain | |||
| 24810 | 24815 | This join has been made in the tandem repeat region (bases 23470 - 25210) and is not confirmed by any other reads. However, the size of the cosmid has been confirmed by restriction digest. | ||||
| 31354 | 31354 | uncertain | ||||
| Clone right end | 19677 | 19680 | F29C6 | |||
| 36048 | 36051 | T22A3 | ||||
| Finished Right | 36048 | 36051 | T22A3 | |||
| Method | Genomic_canonical |
