WormBase Tree Display for Sequence: L4_Nanopore_Roach_39505
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| L4_Nanopore_Roach_39505 | DNA | L4_Nanopore_Roach_39505 | 1076 | ||
|---|---|---|---|---|---|
| DB_info | Database | WormBase | |||
| Origin | Life_stage | WBls:0000038 | |||
| Species | Caenorhabditis elegans | ||||
| Read_coverage | 4 | ||||
| Visible | Title | The full-length transcriptome of C. elegans using direct RNA sequencing for life_stage L4. From Roach, Sadowski et al. (2019) | |||
| Matching_CDS | F46E10.9 | Inferred_automatically | transcript_builder.pl | ||
| Matching_transcript | F46E10.9.1 | Inferred_automatically | transcript_builder.pl | ||
| F46E10.9.2 | Inferred_automatically | transcript_builder.pl | |||
| Remark | There are 4 entries comprising this consensus structure | ||||
| The most 5' extent of this structure has been used as a start. The 3' end is the median of a cluster of (50% : 2 of 4) ends. | |||||
| Properties | cDNA | cDNA_EST | |||
| EST_5 | |||||
| Homol | Homol_homol | BLAT_Nanopore:CHROMOSOME_IV_44 | |||
| BLAT_Nanopore:CHROMOSOME_IV_105 | |||||
| BLAT_Nanopore:CHROMOSOME_V_44 | |||||
| BLAT_Nanopore:CHROMOSOME_I_85 | |||||
| BLAT_Nanopore:OVOC_OM2_96 | |||||
| BLAT_Nanopore:SRAE_scaffold1_1 | |||||
| Method | Nanopore |
