WormBase Tree Display for Sequence: L3_Nanopore_Roach_93179
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L3_Nanopore_Roach_93179 | DNA | L3_Nanopore_Roach_93179 | 1196 | ||
---|---|---|---|---|---|
DB_info | Database | WormBase | |||
Origin | Life_stage | WBls:0000035 | |||
Species | Caenorhabditis elegans | ||||
Read_coverage | 11 | ||||
Visible | Title | The full-length transcriptome of C. elegans using direct RNA sequencing for life_stage L3. From Roach, Sadowski et al. (2019) | |||
Matching_CDS | F01D4.4 | Inferred_automatically | transcript_builder.pl | ||
Matching_transcript | F01D4.4.1 | Inferred_automatically | transcript_builder.pl | ||
Remark | There are 11 entries comprising this consensus structure | ||||
The most 5' extent of this structure has been used as a start. The 3' end is the median of a cluster of (72% : 8 of 11) ends. | |||||
Properties | cDNA | cDNA_EST | |||
EST_5 | |||||
Homol | Homol_homol | BLAT_Nanopore:CHROMOSOME_IV_70 | |||
BLAT_Nanopore:OVOC_OM2_14 | |||||
BLAT_Nanopore:OVOC_OM1b_44 | |||||
BLAT_Nanopore:SRAE_chrX_scaffold2 | |||||
Method | Nanopore |