WormBase Tree Display for Sequence: L3_Nanopore_Roach_61420
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| L3_Nanopore_Roach_61420 | DNA | L3_Nanopore_Roach_61420 | 2275 | ||
|---|---|---|---|---|---|
| DB_info | Database | WormBase | |||
| Origin | Life_stage | WBls:0000035 | |||
| Species | Caenorhabditis elegans | ||||
| Read_coverage | 32 | ||||
| Visible | Title | The full-length transcriptome of C. elegans using direct RNA sequencing for life_stage L3. From Roach, Sadowski et al. (2019) | |||
| Matching_CDS | T07A9.9 | Inferred_automatically | transcript_builder.pl | ||
| Matching_transcript | T07A9.9.2 | Inferred_automatically | transcript_builder.pl | ||
| Remark | There are 32 entries comprising this consensus structure | ||||
| The cluster of 5' starts (93% : 30 of 32) has been used in this consensus. The 3' end is the median of a cluster of (78% : 25 of 32) ends. | |||||
| Properties | cDNA | cDNA_EST | |||
| EST_5 | |||||
| Homol | Homol_homol | BLAT_Nanopore:CHROMOSOME_IV_3 | |||
| BLAT_Nanopore:OVOC_OM2_50 | |||||
| BLAT_Nanopore:OVOC_OM2_51 | |||||
| BLAT_Nanopore:OVOC_OM3_17 | |||||
| BLAT_Nanopore:OVOC_OM4_40 | |||||
| BLAT_Nanopore:SRAE_chr1_29 | |||||
| Method | Nanopore |
