WormBase Tree Display for Sequence: L2_Nanopore_Roach_65548
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L2_Nanopore_Roach_65548 | DNA | L2_Nanopore_Roach_65548 | 672 | ||
---|---|---|---|---|---|
DB_info | Database | WormBase | |||
Origin | Life_stage | WBls:0000027 | |||
Species | Caenorhabditis elegans | ||||
Read_coverage | 3 | ||||
Visible | Title | The full-length transcriptome of C. elegans using direct RNA sequencing for life_stage L2. From Roach, Sadowski et al. (2019) | |||
Matching_CDS | VW02B12L.1 | Inferred_automatically | transcript_builder.pl | ||
Matching_transcript | VW02B12L.1.1 | Inferred_automatically | transcript_builder.pl | ||
Remark | There are 3 entries comprising this consensus structure | ||||
The most 5' extent of this structure has been used as a start. The 3' end is the median of a cluster of (66% : 2 of 3) ends. | |||||
Properties | cDNA | cDNA_EST | |||
EST_5 | |||||
Homol | Homol_homol | BLAT_Nanopore:CHROMOSOME_II_77 | |||
BLAT_Nanopore:OVOC_OM2_4 | |||||
BLAT_Nanopore:OVOC_OM3_67 | |||||
BLAT_Nanopore:SRAE_chr2_31 | |||||
BLAT_Nanopore:SRAE_chr1_43 | |||||
BLAT_Nanopore:SRAE_chrX_scaffold2_4 | |||||
BLAT_Nanopore:SRAE_chrX_scaffold3_6 | |||||
Method | Nanopore |