WormBase Tree Display for Sequence: L2_Nanopore_Roach_28850
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| L2_Nanopore_Roach_28850 | DNA | L2_Nanopore_Roach_28850 | 1602 | ||
|---|---|---|---|---|---|
| DB_info | Database | WormBase | |||
| Origin | Life_stage | WBls:0000027 | |||
| Species | Caenorhabditis elegans | ||||
| Read_coverage | 151 | ||||
| Visible | Title | The full-length transcriptome of C. elegans using direct RNA sequencing for life_stage L2. From Roach, Sadowski et al. (2019) | |||
| Matching_CDS | F01D4.4 | Inferred_automatically | transcript_builder.pl | ||
| Matching_transcript | F01D4.4.1 | Inferred_automatically | transcript_builder.pl | ||
| Remark | There are 151 entries comprising this consensus structure | ||||
| The cluster of 5' starts (87% : 132 of 151) has been used in this consensus. The 3' end is the median of a cluster of (94% : 142 of 151) ends. | |||||
| Properties | cDNA | cDNA_EST | |||
| EST_5 | |||||
| Homol | Homol_homol | BLAT_Nanopore:CHROMOSOME_IV_70 | |||
| BLAT_Nanopore:OVOC_OM2_14 | |||||
| BLAT_Nanopore:OVOC_OM1b_44 | |||||
| BLAT_Nanopore:SRAE_chr1_78 | |||||
| BLAT_Nanopore:SRAE_chrX_scaffold2 | |||||
| Method | Nanopore |
