WormBase Tree Display for Sequence: L1_Nanopore_Roach_29180
expand all nodes | collapse all nodes | view schema
| L1_Nanopore_Roach_29180 | DNA | L1_Nanopore_Roach_29180 | 564 | ||
|---|---|---|---|---|---|
| DB_info | Database | WormBase | |||
| Origin | Life_stage | WBls:0000024 | |||
| Species | Caenorhabditis elegans | ||||
| Read_coverage | 13 | ||||
| Visible | Title | The full-length transcriptome of C. elegans using direct RNA sequencing for life_stage L1. From Roach, Sadowski et al. (2019) | |||
| Matching_CDS | Y46H3A.2 | Inferred_automatically | transcript_builder.pl | ||
| Matching_transcript | Y46H3A.2.1 | Inferred_automatically | transcript_builder.pl | ||
| Remark | There are 13 entries comprising this consensus structure | ||||
| The cluster of 5' starts (69% : 9 of 13) has been used in this consensus. The 3' end is the median of a cluster of (92% : 12 of 13) ends. | |||||
| Properties | cDNA | cDNA_EST | |||
| EST_5 | |||||
| Homol | Homol_homol | BLAT_Nanopore:CHROMOSOME_V_13 | |||
| BLAT_Nanopore:CHROMOSOME_V_61 | |||||
| Method | Nanopore |
