WormBase Tree Display for Sequence: L1_Nanopore_Li_87088
expand all nodes | collapse all nodes | view schema
L1_Nanopore_Li_87088 | DNA | L1_Nanopore_Li_87088 | 692 | ||
---|---|---|---|---|---|
Origin | Life_stage | WBls:0000024 | |||
Species | Caenorhabditis elegans | ||||
Read_coverage | 97 | ||||
Visible | Title | The full-length transcriptome of C. elegans using direct RNA sequencing for life_stage L1. From Li, Ren et al. (2020) | |||
Matching_CDS | Y110A2AL.4b | Inferred_automatically | transcript_builder.pl | ||
Matching_transcript | Y110A2AL.4b.1 | Inferred_automatically | transcript_builder.pl | ||
Remark | There are 97 entries comprising this consensus structure | ||||
The cluster of 5' starts (77% : 75 of 97) has been used in this consensus. The 3' end is the median of a cluster of (94% : 92 of 97) ends. | |||||
Properties | cDNA | cDNA_EST | |||
EST_5 | |||||
Homol | Homol_homol | BLAT_Nanopore:CHROMOSOME_II_18 | |||
BLAT_Nanopore:CHROMOSOME_II_19 | |||||
BLAT_Nanopore:CHROMOSOME_II_48 | |||||
BLAT_Nanopore:CHROMOSOME_II_82 | |||||
BLAT_Nanopore:CHROMOSOME_V_12 | |||||
BLAT_Nanopore:CHROMOSOME_V_134 | |||||
BLAT_Nanopore:CHROMOSOME_X_14 | |||||
BLAT_Nanopore:CHROMOSOME_I_93 | |||||
BLAT_Nanopore:CHROMOSOME_III_2 | |||||
Method | Nanopore |