WormBase Tree Display for Sequence: F39B2
expand all nodes | collapse all nodes | view schema
| F39B2 | DNA | F39B2 | 40356 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child (14) | ||||
| CDS_child (376) | ||||||
| Transcript (16) | ||||||
| Nongenomic | SP13A7 | 4912 | 4950 | |||
| yk358g10 | 22026 | 26613 | ||||
| yk368f11 | 39 | 1195 | ||||
| PCR_product (39) | ||||||
| Allele (769) | ||||||
| Oligo_set (11) | ||||||
| Feature_object (575) | ||||||
| Feature_data | F39B2:Polysome | 1 | 40356 | |||
| F39B2:TranscriptionallyActiveRegion | 1 | 40356 | ||||
| F39B2:ChIPSeqTF | 1 | 40356 | ||||
| F39B2:TRF | 1 | 40356 | ||||
| F39B2:Dust | 1 | 40356 | ||||
| F39B2:inverted | 1 | 40356 | ||||
| Homol_data (20) | ||||||
| Structure | From | Source | CHROMOSOME_I | |||
| Overlap_right | K11B4 | 40243 | ||||
| Overlap_left | K05C4 | |||||
| Clone_left_end | F39B2 | 1 | ||||
| K11B4 | 11777 | |||||
| F12F11 | 38216 | |||||
| Clone_right_end | K05C4 | 4 | ||||
| F12F11 | 2141 | |||||
| F39B2 | 40356 | |||||
| DB_info | Database | EMBL | NDB_AC | Z92834 | ||
| NDB_SV | Z92834.1 | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Dobson R | ||||
| From_laboratory | HX | |||||
| Date_directory | 980331 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | F39B2 | ||||
| Reference | WBPaper00014176 | |||||
| WBPaper00014426 | ||||||
| Remark | [010619 kj] F39B2.9 removed as located in 3' UTR of F39B2.10 (evidence: EST yk619b7.3) | |||||
| [010822 kj] Removed erroneous clone left end tag for K05C4 and clone right end for K11B4 | ||||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | c71467e9afb1cdd34d2b214e9e7063f9 | ||||
| Status | Finished | 31 Mar 1998 00:00:00 | ||||
| Submitted | 09 Mar 1997 00:00:00 | |||||
| Annotated | 01 Jan 1980 00:00:00 | |||||
| Map | Sequence-I | Ends | Left | 7325 | ||
| Right | 7348 | |||||
| Interpolated_map_position | I | 26.8061 | ||||
| Assembly_tags | Clone right end | 4 | 1 | K05C4 | ||
| 2141 | 2138 | F12F11 | ||||
| 40356 | 40353 | F39B2 | ||||
| Clone left end | 1 | 4 | F39B2 | |||
| 11777 | 11780 | K11B4 | ||||
| Finished Left | 1 | 4 | F39B2 | |||
| annotation | 13944 | 13942 | Extra copy of this triplet. K11B4 shows one more copy of AGA than F39B2 for oneclone | |||
| 18101 | 18101 | One clone from F39B2 reads G here. Possible deletion of one copy of the tandem repeat | ||||
| Finished Right | 40356 | 40353 | F39B2 | |||
| Polymorphism | 13944 | 13942 | Extra of this triplet. K11B4 shows one more copy of AGA than F39B2 for one clone | |||
| 18101 | 18101 | One clone from F39B2 reads G here. Possible deletion of one copy of the tandemrepeat | ||||
| comment | 17739 | 17732 | ?mistracking??? | |||
| Method | Genomic_canonical |
