WormBase Tree Display for Sequence: F38A6
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| F38A6 | DNA | F38A6 | 36256 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00001248 | 24215 | 19025 | |
| WBGene00202178 | 10791 | 10583 | ||||
| WBGene00201501 | 6840 | 6716 | ||||
| WBGene00004013 | 7106 | 14371 | ||||
| WBGene00201730 | 17591 | 17887 | ||||
| WBGene00197481 | 6716 | 6840 | ||||
| WBGene00086569 | 27801 | 26494 | ||||
| WBGene00009528 | 29423 | 27797 | ||||
| CDS_child (226) | ||||||
| Transcript (11) | ||||||
| Nongenomic | yk209e10 | 19090 | 24182 | |||
| PCR_product | cenix:139-d3 | 11630 | 12769 | |||
| cenix:20-e1 | 19918 | 20566 | ||||
| mv_AAA96319 | 7107 | 13731 | ||||
| mv_F38A6.2 | 19065 | 24185 | ||||
| p_F38A6.1_93 | 5106 | 7105 | ||||
| p_F38A6.2_93 | 24187 | 26186 | ||||
| sjj2_F38A6.4 | 27661 | 28438 | ||||
| sjj_F38A6.1 | 11630 | 12726 | ||||
| sjj_F38A6.2 | 20344 | 21528 | ||||
| Allele (676) | ||||||
| Oligo_set | Aff_F38A6.1 | 12236 | 13734 | |||
| Aff_F38A6.2 | 20162 | 19063 | ||||
| Feature_object (373) | ||||||
| Feature_data | F38A6:Polysome | 1 | 36256 | |||
| F38A6:TranscriptionallyActiveRegion | 1 | 36256 | ||||
| F38A6:ChIPSeqTF | 1 | 36256 | ||||
| F38A6:TRF | 1 | 36256 | ||||
| F38A6:Dust | 1 | 36256 | ||||
| F38A6:inverted | 1 | 36256 | ||||
| Homol_data (21) | ||||||
| Structure | From | Source | CHROMOSOME_V | |||
| Overlap_right | Y44A6D | 36156 | ||||
| Overlap_left | W07A8 | |||||
| Clone_right_end | W07A8 | 11517 | ||||
| DB_info | Database | EMBL | NDB_AC | Z92833 | ||
| NDB_SV | Z92833.1 | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Mortimore BJ | ||||
| From_laboratory | HX | |||||
| Date_directory | 971016 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | F38A6 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | d9bff4e84ad4b5d218ee8c24258150e2 | ||||
| Status | Finished | 16 Oct 1997 00:00:00 | ||||
| Submitted | 09 Mar 1997 00:00:00 | |||||
| Annotated | 01 Jan 1980 00:00:00 | |||||
| Map | Sequence-V | Ends | Left | 11753 | ||
| Right | 11775 | |||||
| Interpolated_map_position | V | 25.133 | ||||
| Assembly_tags | Clone left end | 1 | 4 | F38A6 | ||
| Finished Left | 1 | 4 | F38A6 | |||
| Clone right end | 11512 | 11517 | W07A8 | |||
| 36253 | 36256 | |||||
| annotation | 30020 | 30010 | This is the only read that calls 11 T's | |||
| 10462 | 10432 | Base calling may not be accurate across Cs and two preceding As. No chemistry clearly calls Cs, so base calling is by eye. | ||||
| Finished Right | 36253 | 36256 | F38A6 | |||
| Method | Genomic_canonical |
