WormBase Tree Display for Sequence: F20B10

F20B10 DNA: F20B10 21914
  SMap: S_child (11)
  Structure: From: Source: CHROMOSOME_IV
    Overlap_right: F35G2 21811
    Overlap_left: B0001
    Clone_left_end: F20B10 1
      F35G2 21811
    Clone_right_end: B0001 4
  DB_info: Database: EMBL NDB_AC Z69636
        NDB_SV Z69636.1
    DB_remark: 960212: B0001 was extended by 100 nt to create an overlap with F20B10. The stolen data came from redundant cosmid ZC197
      [070420 pad] F20B10 contains a 100% identical 8.232kb direct duplication. On detailed analysis, including returning to the original cosmid reads this does not look like an assembly problem as unique reads can be found that prove that Copy 2 follows straight on from Copy 1. To confirm, this is not an assembly issue. This may have been produced as the result of a rescent duplication or simply a cloning artefact.
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Percy CM
    From_laboratory: HX
    Date_directory: 960201
    Species: Caenorhabditis elegans
    Strain: WBStrain00000001
  Visible: Clone: F20B10
  Properties: Genomic_canonical
    Checksum: MD5: 152f1ff739aa6741e62ec601d4fa9aae
    Status: Finished: 01 Feb 1996 00:00:00
      Submitted: 21 Feb 1996 00:00:00
      Annotated: 12 Feb 1996 00:00:00
  Map: Sequence-IV Ends: Left: 6298
        Right: 6313
  Interpolated_map_position: IV 5.77175
  Assembly_tags: annotation 3479 3484 tandem repeat size agrees with pcr check and restriction digest. Some templates show variation in individual bases
      4228 4228 variation between copies of the repeat some templates call T
      4380 4380 variation between copies of repeat some templates call TTTT edited to TTCT
      9133 9133 this template only shows 10 A'sand it could be in either copy of the repeat
    Finished Right 21914 21914
    Clone left end 1 4 F20B10
      21811 21814 left end of F35G2
    Clone right end 1 4 B0001
      7033 7038 ZC197
    Finished Left 1 1
  Method: Genomic_canonical