WormBase Tree Display for Sequence: D1005
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| D1005 | DNA | D1005 | 34372 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00023263 | 21335 | 21254 | |
| WBGene00206384 | 33433 | 33154 | ||||
| WBGene00199600 | 15108 | 15012 | ||||
| WBGene00174213 | 6535 | 6555 | ||||
| WBGene00016999 | 20228 | 17928 | ||||
| WBGene00199087 | 15012 | 15108 | ||||
| WBGene00016996 | 6270 | 10046 | ||||
| WBGene00017000 | 12047 | 10012 | ||||
| WBGene00016998 | 33066 | 32101 | ||||
| WBGene00016995 | 26790 | 31335 | ||||
| CDS_child (156) | ||||||
| Transcript | D1005.5b | 20167 | 18246 | |||
| D1005.7 | 6535 | 6555 | ||||
| D1005.8 | 15012 | 15108 | ||||
| D1005.9 | 15108 | 15012 | ||||
| D1005.1.1 | 26790 | 31335 | ||||
| D1005.10.1 | 33433 | 33154 | ||||
| D1005.2.1 | 6270 | 10046 | ||||
| D1005.4.1 | 33066 | 32101 | ||||
| D1005.5a.1 | 20228 | 17928 | ||||
| D1005.6.1 | 12047 | 10012 | ||||
| Pseudogene | D1005.t1 | 21335 | 21254 | |||
| PCR_product (21) | ||||||
| Allele (604) | ||||||
| Oligo_set | Aff_D1005.1 | 30306 | 31335 | |||
| Aff_D1005.2 | 8411 | 9935 | ||||
| Aff_D1005.4 | 32955 | 32044 | ||||
| Aff_D1005.5 | 19448 | 18246 | ||||
| Aff_D1005.6 | 11668 | 10363 | ||||
| Feature_object (280) | ||||||
| Feature_data | D1005:Polysome | 1 | 34372 | |||
| D1005:TranscriptionallyActiveRegion | 1 | 34372 | ||||
| D1005:ChIPSeqTF | 1 | 34372 | ||||
| D1005:TRF | 1 | 34372 | ||||
| D1005:Dust | 1 | 34372 | ||||
| D1005:inverted | 1 | 34372 | ||||
| Homol_data (20) | ||||||
| Structure | From | Source | CHROMOSOME_X | |||
| Overlap_right | F09E10 | 33673 | ||||
| Overlap_left | W05H7 | |||||
| Clone_left_end | D1005 | 1 | ||||
| F09E10 | 34173 | |||||
| Clone_right_end | W05H7 | 15686 | ||||
| DB_info | Database | EMBL | NDB_AC | FO080989 | ||
| NDB_ID | _U58727 | |||||
| NDB_SV | FO080989.2 | |||||
| Secondary_accession | U58727 | |||||
| DB_remark | The 5' clone is W05H7, 200 bp overlap; the 3' clone is F09E10, 700 bp overlap. Actual start of this clone is at base position 1 of D1005; actual end is at 6710 of F09E10. | |||||
| [121025] Sequence correction: SNP 0 bases @ 19557 | ||||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Wohldmann P | ||||
| Hawkins J | ||||||
| Wilson RK | ||||||
| From_laboratory | RW | |||||
| Date | 02 Feb 1996 00:00:00 | |||||
| Date_directory | 960126 | |||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | D1005 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 2dcf10cf0008c80261b99445a794bab6 | ||||
| Status | Shotgun | |||||
| Finished | ||||||
| Submitted | 02 Feb 1996 00:00:00 | |||||
| Map | Sequence-X | |||||
| Interpolated_map_position | X | -18.0955 | ||||
| Method | Genomic_canonical |
