WormBase Tree Display for Sequence: C05B5
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C05B5 | DNA | C05B5 | 30321 | ||
---|---|---|---|---|---|
SMap | S_child (11) | ||||
Structure | From | Source | CHROMOSOME_III | ||
Overlap_right | M04D8 | 30116 | |||
Overlap_left | R10E12 | ||||
Clone_left_end | M04D8 | 18844 | |||
Clone_right_end | R10E12 | 8391 | |||
DB_info | Database | EMBL | NDB_AC | Z32679 | |
NDB_SV | Z32679.2 | ||||
DB_remark | [121025] Sequence correction: SNP 0 bases @ 29668 | ||||
[121025] Sequence correction WBsf268039 : Insertion G1 bases from @ 17141 | |||||
Keyword | HTG | ||||
EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | |||
Origin | From_author | Mortimore BJ | |||
From_laboratory | HX | ||||
Date_directory | 940721 | ||||
Species | Caenorhabditis elegans | ||||
Strain | WBStrain00000001 | ||||
Visible | Clone | C05B5 | |||
Reference | WBPaper00022450 | ||||
Properties | Genomic_canonical | ||||
Checksum | MD5 | 98dc18b495415c9a4e350faf38356c43 | |||
Status | Finished | 21 Jul 1994 00:00:00 | |||
Submitted | 22 Apr 1994 00:00:00 | ||||
Annotated | 21 Apr 1994 00:00:00 | ||||
Map | Sequence-III | Ends | Left | 5163 | |
Right | 5191 | ||||
Interpolated_map_position | III | 1.49056 | |||
Assembly_tags | comment | 1 | 3 | pJB8 | |
8385 | 8389 | pJB8 | |||
8374 | 8391 | ?end of R10E12 overlap | |||
9758 | 9766 | Discrepancy on both -ve strands terminate | |||
10031 | 10050 | from GATTTTGGCCCGTTT to GATTTTGCCCGTTT | |||
13038 | 13040 | Missing base on only +ve strand | |||
14423 | 14426 | Discrepancy between strands | |||
14440 | 14442 | Discreopancy again | |||
15001 | 15006 | ?oops! Re do with ice walk or something | |||
15030 | 15032 | Discrepancy between only 2 strands available Same for next 3 tags!! | |||
Discreapncy between only 2 strands available | |||||
15039 | 15041 | Disrepancy | |||
Same again | |||||
15069 | 15086 | Eh?! | |||
16361 | 16370 | needs double stranding read gappy and no other reads | |||
18844 | 18862 | ?start of M04D8 overlap | |||
22745 | 22747 | All +ve strands say 1G. All -ve strands say 2G's | |||
30214 | 30251 | Up to here is my part of the M04D8 overlap!! | |||
Method | Genomic_canonical |