WormBase Tree Display for Sequence: T07D3
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T07D3 | DNA | T07D3 | 33706 | |||
---|---|---|---|---|---|---|
SMap | S_child | Gene_child (12) | ||||
CDS_child (171) | ||||||
Transcript (12) | ||||||
Pseudogene | T07D3.1 | 31963 | 33577 | |||
T07D3.3 | 21401 | 24917 | ||||
T07D3.5 | 12115 | 13687 | ||||
T07D3.6 | 8060 | 11532 | ||||
Transposon | WBTransposon00000035 | 23359 | 21749 | |||
PCR_product (79) | ||||||
Allele (1332) | ||||||
Oligo_set | Aff_T07D3.1 | 32495 | 33576 | |||
Aff_T07D3.2 | 29675 | 31152 | ||||
Aff_T07D3.3 | 23697 | 24916 | ||||
Aff_T07D3.4 | 17385 | 18221 | ||||
Aff_T07D3.5 | 13417 | 14567 | ||||
Aff_T07D3.6 | 8946 | 11343 | ||||
Aff_T07D3.7 | 4964 | 6014 | ||||
Aff_T07D3.9 | 26974 | 25733 | ||||
Feature_object (202) | ||||||
Feature_data | T07D3:Polysome | 1 | 33706 | |||
T07D3:TranscriptionallyActiveRegion | 1 | 33706 | ||||
T07D3:ChIPSeqTF | 1 | 33706 | ||||
T07D3:TRF | 1 | 33706 | ||||
T07D3:Dust | 1 | 33706 | ||||
T07D3:inverted | 1 | 33706 | ||||
Homol_data (19) | ||||||
Structure | From | Source | CHROMOSOME_II | |||
Overlap_right | R07C3 | 33507 | ||||
Overlap_left | Y46B2A | |||||
Clone_left_end | R07C3 | 33507 | ||||
T07D3 | 1 | |||||
DB_info | Database | EMBL | NDB_AC | FO081675 | ||
NDB_ID | _AF016682 | |||||
NDB_SV | FO081675.1 | |||||
Secondary_accession | AF016682 | |||||
DB_remark | The 5' clone is Y46B2A, 200 bp overlap; the 3' clone is R07C3, 200 bp overlap. Actual start of this clone is at base position 1 of T07D3; actual end is at 2312 of R07C3. | |||||
Keyword | HTG | |||||
EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
Origin (5) | ||||||
Visible | Clone | T07D3 | ||||
Remark | added a C at position 6316 based on pcr data. [tb 20040616] | |||||
Properties | Genomic_canonical | |||||
Checksum | MD5 | c589db89cce7a697ca0c95f0b9b40ba3 | ||||
Status | Shotgun | |||||
Finished | ||||||
Submitted | 15 Jan 1997 00:00:00 | |||||
Map | Sequence-II | |||||
Interpolated_map_position | II | -15.5897 | ||||
Method | Genomic_canonical |