WormBase Tree Display for Sequence: C07A12
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| C07A12 | DNA | C07A12 | 45527 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child (18) | ||||
| CDS_child (225) | ||||||
| Transcript (26) | ||||||
| Genomic_non_canonical | WRM061cD01 | 4261 | 38663 | |||
| WRM063bD12 | 3386 | 40442 | ||||
| WRM064bD10 | 5770 | 43772 | ||||
| WRM064dG01 | 8016 | 41868 | ||||
| WRM065aG05 | 3454 | 37743 | ||||
| WRM069aC03 | 622 | 36376 | ||||
| WRM0610dC03 | 4567 | 38332 | ||||
| WRM0613dH11 | 9304 | 41478 | ||||
| WRM0633bG03 | 9526 | 43708 | ||||
| WRM0634cD06 | 1367 | 32911 | ||||
| Nongenomic | yk215f10 | 18957 | 23566 | |||
| yk247c5 | 273 | 2974 | ||||
| PCR_product (21) | ||||||
| Allele (654) | ||||||
| Oligo_set | Aff_C07A12.2 | 31028 | 31570 | |||
| Aff_C07A12.3 | 20580 | 23410 | ||||
| Aff_C07A12.4 | 11707 | 12356 | ||||
| Aff_C07A12.5 | 1954 | 2605 | ||||
| Aff_C07A12.7 | 4810 | 4051 | ||||
| Aff_C07A12.1 | 43733 | 44965 | ||||
| Feature_object (443) | ||||||
| Feature_data | C07A12:Polysome | 1 | 45527 | |||
| C07A12:TranscriptionallyActiveRegion | 1 | 45527 | ||||
| C07A12:ChIPSeqTF | 1 | 45527 | ||||
| C07A12:TRF | 1 | 45527 | ||||
| C07A12:Dust | 1 | 45527 | ||||
| C07A12:inverted | 1 | 45527 | ||||
| Homol_data (21) | ||||||
| Structure | From | Source | CHROMOSOME_X | |||
| Overlap_right | C05E11 | 41728 | ||||
| Overlap_left | F46H6 | |||||
| Clone_left_end | C07A12 | 499 | ||||
| C05E11 | 41924 | |||||
| Clone_right_end | F46H6 | 12173 | ||||
| W01H5 | 1969 | |||||
| C07A12 | 43128 | |||||
| DB_info | Database | EMBL | NDB_AC | FO080373 | ||
| NDB_ID | _U41542 | |||||
| NDB_SV | FO080373.2 | |||||
| Secondary_accession | U41542 | |||||
| DB_remark | The 5' clone is F46H6, 698 bp overlap; the 3' clone is C05E11, 3800 bp overlap. Actual start of this clone is at base position 498 of C07A12; actual end is at 43130 of C07A12. | |||||
| [121025] Sequence correction: SNP 0 bases @ 102 | ||||||
| [121025] Sequence correction WBsf267893 : Deletion T-1 bases @ 34501 | ||||||
| [121025] Sequence correction WBsf268539 : Deletion A-1 bases @ 36197 | ||||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Geisel C | ||||
| Wilson RK | ||||||
| From_laboratory | RW | |||||
| Date | 10 Sep 1999 00:00:00 | |||||
| 17 Nov 1995 00:00:00 | ||||||
| Date_directory | 951110 | |||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | C07A12 | ||||
| Reference | WBPaper00022573 | |||||
| Remark | [20020711 db] removed 2 bp from the sequence: "T" at 270 and "C" at 272; based on data communicated by Bernard Lakowski | |||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 45b331db6d179daa04023643130e3619 | ||||
| Status | Finished | |||||
| Submitted | 10 Sep 1999 00:00:00 | |||||
| Map | Sequence-X | |||||
| Interpolated_map_position | X | -7.34224 | ||||
| Method | Genomic_canonical |
