WormBase Tree Display for Sequence: F55F3
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| F55F3 | DNA | F55F3 | 42521 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child (13) | ||||
| CDS_child (150) | ||||||
| Transcript (21) | ||||||
| Transposon | WBTransposon00000387 | 14119 | 13770 | |||
| PCR_product | cenix:125-e7 | 10211 | 10670 | |||
| cenix:148-a6 | 12259 | 13445 | ||||
| cenix:228-e1 | 38901 | 39175 | ||||
| cenix:58-b2 | 17934 | 18887 | ||||
| cenix:58-d2 | 538 | 1457 | ||||
| mv_F55F3.1 | 7679 | 10562 | ||||
| mv_F55F3.2 | 12154 | 15787 | ||||
| mv_F55F3.3 | 17907 | 22354 | ||||
| mv_F55F3.4 | 37417 | 41079 | ||||
| p_F55F3.2a_93 | 10564 | 12152 | ||||
| p_F55F3.3_93 | 22356 | 24355 | ||||
| sjj_F55F3.1 | 8950 | 10842 | ||||
| sjj_F55F3.2 | 12640 | 13715 | ||||
| sjj_F55F3.3 | 17464 | 19775 | ||||
| sjj_F55F3.4 | 40021 | 41063 | ||||
| sjj_K11E4.5 | 1307 | 2408 | ||||
| Allele (648) | ||||||
| Oligo_set | Aff_F55F3.1 | 8892 | 10565 | |||
| Aff_F55F3.2 | 14574 | 15789 | ||||
| Aff_F55F3.3 | 18944 | 17905 | ||||
| Aff_F55F3.4 | 40436 | 41081 | ||||
| Aff_K11E4.5 | 2103 | 3212 | ||||
| Feature_object (350) | ||||||
| Feature_data | F55F3:Polysome | 1 | 42521 | |||
| F55F3:TranscriptionallyActiveRegion | 1 | 42521 | ||||
| F55F3:ChIPSeqTF | 1 | 42521 | ||||
| F55F3:TRF | 1 | 42521 | ||||
| F55F3:Dust | 1 | 42521 | ||||
| F55F3:inverted | 1 | 42521 | ||||
| Homol_data (21) | ||||||
| Structure | From | Source | CHROMOSOME_X | |||
| Overlap_right | ZK1086 | 42418 | ||||
| Overlap_left | Y6D6A | |||||
| Clone_left_end | F55F3 | 1 | ||||
| ZK1086 | 22967 | |||||
| Clone_right_end | F55F3 | 42521 | ||||
| DB_info | Database | EMBL | NDB_AC | Z81550 | ||
| NDB_SV | Z81550.1 | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Steward CA | ||||
| From_laboratory | HX | |||||
| Date_directory | 980512 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | F55F3 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 383b80779c8bcff5c401ef6db2d0189a | ||||
| Status | Finished | 12 May 1998 00:00:00 | ||||
| Submitted | 06 Nov 1996 00:00:00 | |||||
| Annotated | 01 Jan 1980 00:00:00 | |||||
| Map | Sequence-X | Ends | Left | 7460 | ||
| Right | 7480 | |||||
| Interpolated_map_position | X | 14.855 | ||||
| Assembly_tags | Finished Left | 4 | 1 | F55F3 | ||
| Clone left end | 4 | 1 | F55F3 | |||
| 22967 | 22964 | ZK1086 | ||||
| Clone right end | 42521 | 42518 | F55F3 | |||
| annotation | 11767 | 11748 | Single stranded region in inverted repeat. Assembly confirmed by restriction digest. | |||
| 27510 | 27485 | [ ] Tandem repeat [ ] Single clone region [ ] Forced join [X] Other Comment: Number of Gs is uncertain | ||||
| 38775 | 38763 | 3 clones give 12 As. (edited to 13) 6 clones give 13 As 1 clone gives 14 As (edited to 13) | ||||
| Finished Right | 42521 | 42518 | F55F3 | |||
| Method | Genomic_canonical |
