WormBase Tree Display for Sequence: F44F4
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| F44F4 | DNA | F44F4 | 40094 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child (13) | ||||
| CDS_child (222) | ||||||
| Transcript (15) | ||||||
| Transposon | WBTransposon00000157 | 25239 | 26484 | |||
| Nongenomic | yk244g8 | 20816 | 25235 | |||
| yk297d2 | 10582 | 13971 | ||||
| yk316g8 | 10703 | 13986 | ||||
| PCR_product | TH:26-d10_9 | 25451 | 26087 | |||
| WBPaper00038381:F44F4_1_1 | 3835 | 4455 | ||||
| cenix:103-a1 | 23546 | 24321 | ||||
| cenix:106-f1 | 29783 | 30660 | ||||
| cenix:117-g12 | 14593 | 16086 | ||||
| cenix:121-e1 | 5357 | 6053 | ||||
| cenix:166-f4 | 3718 | 4028 | ||||
| cenix:184-f9 | 1637 | 1785 | ||||
| cenix:184-g9 | 37542 | 37666 | ||||
| cenix:196-f9 | 36810 | 36924 | ||||
| cenix:201-f10 | 12077 | 13716 | ||||
| cenix:206-c2 | 21622 | 23023 | ||||
| cenix:221-d1 | 39784 | 39907 | ||||
| cenix:238-e2 | 36300 | 36440 | ||||
| cenix:26-d10_9 | 25451 | 26087 | ||||
| mv_B0280.6_10 | 25391 | 26407 | ||||
| mv_C10H11.2_9 | 25391 | 26407 | ||||
| mv_C16C8.6_9 | 25466 | 26407 | ||||
| mv_C36A4.7_10 | 25391 | 26407 | ||||
| mv_E03H4.1_9 | 25391 | 26407 | ||||
| mv_F11D11.9_8 | 25391 | 26455 | ||||
| mv_F16D3.5_9 | 25391 | 26407 | ||||
| mv_F27B3.4_10 | 25391 | 26407 | ||||
| mv_F44F4.1 | 1685 | 3143 | ||||
| mv_F44F4.10 | 36693 | 37972 | ||||
| mv_F44F4.13 | 29566 | 31074 | ||||
| mv_F44F4.2 | 3291 | 5195 | ||||
| mv_F44F4.3 | 5487 | 6633 | ||||
| mv_F44F4.4 | 10042 | 13912 | ||||
| mv_F44F4.5 | 14109 | 15843 | ||||
| mv_F44F4.6 | 20800 | 22959 | ||||
| mv_F44F4.7 | 23514 | 25187 | ||||
| mv_F44F4.9 | 35901 | 36524 | ||||
| mv_Y45F10C.5_10 | 25391 | 25975 | ||||
| mv_Y53F4B.34_10 | 25391 | 26407 | ||||
| mv_Y57E12AL.d_11 | 25964 | 26407 | ||||
| mv_Y64G10A.5_10 | 25391 | 26407 | ||||
| mv_Y95B8A.3_9 | 25391 | 26407 | ||||
| mv_ZC132.1_10 | 25391 | 26407 | ||||
| mv_ZC53.3_9 | 25664 | 26407 | ||||
| mv_ZK1225.3_9 | 25391 | 26407 | ||||
| p_F44F4.10_93 | 37974 | 39475 | ||||
| p_F44F4.13_93 | 31076 | 33075 | ||||
| p_F44F4.2_93 | 5197 | 5496 | ||||
| p_F44F4.3_93 | 6635 | 8634 | ||||
| p_F44F4.7_93 | 25189 | 25488 | ||||
| sjj2_F44F4.3 | 5378 | 6053 | ||||
| sjj2_F44F4.9 | 35734 | 36622 | ||||
| sjj_C14A6.4_10 | 25413 | 26209 | ||||
| sjj_C33A12.5_10 | 25413 | 26238 | ||||
| sjj_F35B3.2_12 | 25413 | 26209 | ||||
| sjj_F44F4.1 | 1656 | 3216 | ||||
| sjj_F44F4.10 | 36620 | 38055 | ||||
| sjj_F44F4.13 | 29783 | 31360 | ||||
| sjj_F44F4.2 | 4009 | 5181 | ||||
| sjj_F44F4.3 | 5529 | 6578 | ||||
| sjj_F44F4.4 | 10439 | 11611 | ||||
| sjj_F44F4.5 | 14588 | 16078 | ||||
| sjj_F44F4.6 | 20949 | 21971 | ||||
| sjj_F44F4.7 | 23546 | 25182 | ||||
| sjj_F44F4.8 | 25451 | 26521 | ||||
| sjj_F44F4.9 | 35494 | 36510 | ||||
| sjj_K09E10.3_10 | 25343 | 26296 | ||||
| sjj_Y57E12_247.a_10 | 25413 | 25883 | ||||
| smd_C33A12.5_10 | 25413 | 26238 | ||||
| smd_F35B3.2_12 | 25413 | 26209 | ||||
| smd_F44F4.10 | 36793 | 37970 | ||||
| smd_F44F4.8 | 25451 | 26521 | ||||
| smd_K09E10.3_10 | 25343 | 26296 | ||||
| smd_Y57E12_247.a_10 | 25413 | 25883 | ||||
| Allele (581) | ||||||
| Oligo_set | Aff_F44F4.1 | 1684 | 3145 | |||
| Aff_F44F4.10 | 37615 | 36691 | ||||
| Aff_F44F4.13 | 30525 | 29564 | ||||
| Aff_F44F4.2 | 3934 | 3289 | ||||
| Aff_F44F4.3 | 6386 | 5485 | ||||
| Aff_F44F4.4 | 13153 | 13914 | ||||
| Aff_F44F4.5 | 15336 | 14107 | ||||
| Aff_F44F4.6 | 21655 | 20798 | ||||
| Aff_F44F4.7 | 24649 | 23512 | ||||
| Aff_F44F4.9 | 36525 | 35899 | ||||
| Feature_object (187) | ||||||
| Feature_data | F44F4:Polysome | 1 | 40094 | |||
| F44F4:TranscriptionallyActiveRegion | 1 | 40094 | ||||
| F44F4:ChIPSeqTF | 1 | 40094 | ||||
| F44F4:TRF | 1 | 40094 | ||||
| F44F4:Dust | 1 | 40094 | ||||
| F44F4:inverted | 1 | 40094 | ||||
| Homol_data (20) | ||||||
| Structure | From | Source | CHROMOSOME_II | |||
| Overlap_right | Y19D2B | 39994 | ||||
| Overlap_left | F59E10 | |||||
| Clone_right_end | F59E10 | 30193 | ||||
| F44F4 | 40094 | |||||
| DB_info | Database | EMBL | NDB_AC | Z37092 | ||
| NDB_SV | Z37092.1 | |||||
| DB_remark | [980513 dl] : Removed 20 bp of vector from right end of cosmid. | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Coles L | ||||
| From_laboratory | HX | |||||
| Date_directory | 980512 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | F44F4 | ||||
| Reference | WBPaper00022796 | |||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | ca6be40109042145ffe3a15f91924d30 | ||||
| Status | Finished | 12 May 1998 00:00:00 | ||||
| Submitted | 10 Sep 1994 00:00:00 | |||||
| Annotated | 08 Sep 1994 00:00:00 | |||||
| Map | Sequence-II | Ends | Left | 6437 | ||
| Right | 6465 | |||||
| Interpolated_map_position | II | 3.13219 | ||||
| Assembly_tags | ignore cutoff (cloning vector) | 1 | 5 | Lorist6 | ||
| 30189 | 30193 | Lorist6 | ||||
| annotation | 1 | 10 | Left end of F44F4 | |||
| 2761 | 2814 | Poor quality negative read, backed up by 5 positive terminators. (Neg attempted >5 times). | ||||
| 30185 | 30193 | Right end of F59E10 | ||||
| 40091 | 40094 | Right end of F44F4 | ||||
| 40090 | 40094 | Right end of F44F4 | ||||
| Method | Genomic_canonical |
