WormBase Tree Display for Sequence: L4_Nanopore_Roach_50653
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| L4_Nanopore_Roach_50653 | DNA | L4_Nanopore_Roach_50653 | 518 | ||
|---|---|---|---|---|---|
| DB_info | Database | WormBase | |||
| Origin | Life_stage | WBls:0000038 | |||
| Species | Caenorhabditis elegans | ||||
| Read_coverage | 102 | ||||
| Visible | Title | The full-length transcriptome of C. elegans using direct RNA sequencing for life_stage L4. From Roach, Sadowski et al. (2019) | |||
| Matching_CDS | C50F4.5 | Inferred_automatically | transcript_builder.pl | ||
| Matching_transcript | C50F4.5.1 | Inferred_automatically | transcript_builder.pl | ||
| Remark | There are 102 entries comprising this consensus structure | ||||
| The cluster of 5' starts (90% : 92 of 102) has been used in this consensus. The 3' end is the median of a cluster of (92% : 94 of 102) ends. | |||||
| Properties | cDNA | cDNA_EST | |||
| EST_5 | |||||
| Homol | Homol_homol | BLAT_Nanopore:CHROMOSOME_V_64 | |||
| BLAT_Nanopore:OVOC_OM2_3 | |||||
| BLAT_Nanopore:OVOC_OM2_14 | |||||
| BLAT_Nanopore:OVOC_OM3_22 | |||||
| BLAT_Nanopore:OVOC_OM1b_57 | |||||
| BLAT_Nanopore:OVOC_OM1b_78 | |||||
| BLAT_Nanopore:OVOC_OM1b_152 | |||||
| BLAT_Nanopore:SRAE_chr2_3 | |||||
| BLAT_Nanopore:SRAE_chr2_25 | |||||
| BLAT_Nanopore:SRAE_chr2_30 | |||||
| BLAT_Nanopore:SRAE_chr1_11 | |||||
| BLAT_Nanopore:SRAE_chr1_21 | |||||
| BLAT_Nanopore:SRAE_chr1_24 | |||||
| Method | Nanopore |
