WormBase Tree Display for Sequence: L1_Nanopore_Li_52050
expand all nodes | collapse all nodes | view schema
| L1_Nanopore_Li_52050 | DNA | L1_Nanopore_Li_52050 | 1507 | ||
|---|---|---|---|---|---|
| Origin | Life_stage | WBls:0000024 | |||
| Species | Caenorhabditis elegans | ||||
| Read_coverage | 2 | ||||
| Visible | Title | The full-length transcriptome of C. elegans using direct RNA sequencing for life_stage L1. From Li, Ren et al. (2020) | |||
| Matching_CDS | W01G7.5 | Inferred_automatically | transcript_builder.pl | ||
| Matching_transcript | W01G7.5.1 | Inferred_automatically | transcript_builder.pl | ||
| Remark | There are 2 entries comprising this consensus structure | ||||
| The most 5' extent of this structure has been used as a start. The 3' end is the median of a cluster of (50% : 1 of 2) ends. | |||||
| Properties | cDNA | cDNA_EST | |||
| EST_5 | |||||
| Homol | Homol_homol | BLAT_Nanopore:CHROMOSOME_IV | |||
| BLAT_Nanopore:CHROMOSOME_IV_3 | |||||
| BLAT_Nanopore:CHROMOSOME_IV_13 | |||||
| BLAT_Nanopore:CHROMOSOME_IV_29 | |||||
| BLAT_Nanopore:CHROMOSOME_IV_114 | |||||
| BLAT_Nanopore:CHROMOSOME_II_94 | |||||
| BLAT_Nanopore:CHROMOSOME_II_101 | |||||
| BLAT_Nanopore:CHROMOSOME_V_18 | |||||
| BLAT_Nanopore:CHROMOSOME_V_129 | |||||
| BLAT_Nanopore:CHROMOSOME_V_136 | |||||
| BLAT_Nanopore:CHROMOSOME_X_4 | |||||
| BLAT_Nanopore:CHROMOSOME_X_60 | |||||
| BLAT_Nanopore:CHROMOSOME_I | |||||
| BLAT_Nanopore:CHROMOSOME_I_4 | |||||
| BLAT_Nanopore:CHROMOSOME_I_17 | |||||
| BLAT_Nanopore:CHROMOSOME_I_46 | |||||
| BLAT_Nanopore:CHROMOSOME_I_75 | |||||
| BLAT_Nanopore:CHROMOSOME_I_92 | |||||
| BLAT_Nanopore:CHROMOSOME_I_96 | |||||
| BLAT_Nanopore:CHROMOSOME_III | |||||
| BLAT_Nanopore:CHROMOSOME_III_6 | |||||
| BLAT_Nanopore:CHROMOSOME_III_16 | |||||
| BLAT_Nanopore:CHROMOSOME_III_36 | |||||
| BLAT_Nanopore:CHROMOSOME_III_90 | |||||
| Method | Nanopore |
