WormBase Tree Display for Sequence: T04A11
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T04A11 | DNA | T04A11 | 39283 | |||
---|---|---|---|---|---|---|
SMap | S_child | Gene_child (13) | ||||
CDS_child (112) | ||||||
Transcript (13) | ||||||
Pseudogene | T04A11.11:wp217 | 38028 | 39065 | |||
T04A11.13:wp217 | 17883 | 17661 | ||||
T04A11.14 | 34889 | 35046 | ||||
PCR_product | cenix:109-e6 | 26531 | 27304 | |||
cenix:11-a5 | 18541 | 19137 | ||||
cenix:149-c8 | 24756 | 25130 | ||||
cenix:167-b4 | 30058 | 30935 | ||||
cenix:187-b1 | 34000 | 34148 | ||||
cenix:199-h8 | 5964 | 6112 | ||||
cenix:199-h8_1 | 13501 | 13649 | ||||
cenix:219-b1 | 2223 | 2347 | ||||
cenix:219-b1_1 | 9760 | 9884 | ||||
cenix:222-a8 | 5086 | 5205 | ||||
cenix:222-a8_1 | 12623 | 12742 | ||||
cenix:222-h7 | 3042 | 3165 | ||||
cenix:222-h7_1 | 10579 | 10702 | ||||
cenix:29-f3 | 3189 | 4094 | ||||
cenix:29-f3_1 | 10726 | 11631 | ||||
cenix:29-g3 | 3189 | 4094 | ||||
cenix:29-g3_1 | 10726 | 11631 | ||||
cenix:33-b3 | 4883 | 6244 | ||||
cenix:33-b3_1 | 12420 | 13781 | ||||
cenix:53-f5_1 | 7301 | 7816 | ||||
mv_B0303.5_15 | 38029 | 39063 | ||||
mv_F11D11.2_16 | 37884 | 39063 | ||||
mv_F56A6.3_15 | 38029 | 39063 | ||||
mv_K08A2.6_15 | 38029 | 39063 | ||||
mv_K10B3.2_16 | 37819 | 39063 | ||||
mv_T02G5.5_15 | 38029 | 39063 | ||||
mv_T04A11.1 | 2792 | 4521 | ||||
mv_T04A11.10 | 33178 | 35177 | ||||
mv_T04A11.11 | 38029 | 39063 | ||||
mv_T04A11.1_1 | 10329 | 12058 | ||||
mv_T04A11.2 | 4855 | 6479 | ||||
mv_T04A11.2_1 | 12392 | 14016 | ||||
mv_T04A11.3 | 6492 | 9904 | ||||
mv_T04A11.6 | 15060 | 22617 | ||||
mv_T04A11.7 | 23527 | 25322 | ||||
mv_T04A11.8 | 26019 | 27891 | ||||
mv_T04A11.9 | 29781 | 31533 | ||||
mv_T20H12.2_15 | 38029 | 39063 | ||||
mv_W07E6.6_15 | 38029 | 39063 | ||||
mv_Y45F10D.1_16 | 38029 | 39063 | ||||
mv_Y47H9C.3_15 | 38029 | 39063 | ||||
mv_Y48G10A.5_15 | 38029 | 39063 | ||||
mv_Y6B3B.8_15 | 38029 | 39063 | ||||
mv_ZC247.4_15 | 38029 | 39063 | ||||
p_T04A11.11_93 | 36028 | 38027 | ||||
p_T04A11.4_93 | 4523 | 4854 | ||||
p_T04A11.4_93_1 | 12060 | 12391 | ||||
p_T04A11.5_93 | 14018 | 15060 | ||||
sjj2_T04A11.12 | 15641 | 16626 | ||||
sjj_B0303.5_14 | 38252 | 39179 | ||||
sjj_C01B12.6_14 | 38252 | 39179 | ||||
sjj_C25G4.10 | 1534 | 2571 | ||||
sjj_C25G4.10_1 | 9071 | 10108 | ||||
sjj_F11D11.2_15 | 37835 | 39179 | ||||
sjj_F38A1.2_14 | 38252 | 39179 | ||||
sjj_K08A2.c_14 | 37835 | 39179 | ||||
sjj_K10B3.2_15 | 37661 | 39179 | ||||
sjj_R10H1.3_14 | 38252 | 39179 | ||||
sjj_T02G5.5_14 | 38252 | 39179 | ||||
sjj_T04A11.1 | 2948 | 4094 | ||||
sjj_T04A11.10 | 34237 | 35190 | ||||
sjj_T04A11.11 | 37979 | 39036 | ||||
sjj_T04A11.1_1 | 10485 | 11631 | ||||
sjj_T04A11.2 | 4883 | 6244 | ||||
sjj_T04A11.2_1 | 12420 | 13781 | ||||
sjj_T04A11.3 | 1534 | 2571 | ||||
sjj_T04A11.3_1 | 9071 | 10108 | ||||
sjj_T04A11.4 | 2948 | 4094 | ||||
sjj_T04A11.4_1 | 10485 | 11631 | ||||
sjj_T04A11.5 | 4883 | 6244 | ||||
sjj_T04A11.5_1 | 12420 | 13781 | ||||
sjj_T04A11.6 | 18893 | 20069 | ||||
sjj_T04A11.7 | 23202 | 24775 | ||||
sjj_T04A11.8 | 25986 | 28213 | ||||
sjj_T04A11.9 | 30482 | 31637 | ||||
sjj_T20H12.2_14 | 38252 | 39179 | ||||
sjj_W07E6.6_14 | 37661 | 39179 | ||||
sjj_Y45F10D.1_14 | 37979 | 39036 | ||||
sjj_Y47H9C.3_14 | 38252 | 39179 | ||||
sjj_Y48G10A.a_14 | 37661 | 39179 | ||||
sjj_Y6B3B.8_14 | 38252 | 39179 | ||||
smd_C01B12.6:2_14 | 38252 | 39179 | ||||
smd_C01B12.6_15 | 37807 | 38961 | ||||
smd_F11D11.2:2_16 | 37807 | 38972 | ||||
smd_F11D11.2_15 | 37835 | 39179 | ||||
smd_F38A1.2_14 | 38252 | 39179 | ||||
smd_K08A2.c_14 | 37835 | 39179 | ||||
smd_K10B3.2_15 | 37661 | 39179 | ||||
smd_R10H1.3:2_14 | 38252 | 39179 | ||||
smd_T02G5.5:2_14 | 38252 | 39179 | ||||
smd_T02G5.5_15 | 38063 | 39261 | ||||
smd_T04A11.3 | 1534 | 2571 | ||||
smd_T04A11.3_1 | 9071 | 10108 | ||||
smd_T04A11.4 | 2948 | 4094 | ||||
smd_T04A11.4_1 | 10485 | 11631 | ||||
smd_T04A11.5 | 4883 | 6244 | ||||
smd_T04A11.5_1 | 12420 | 13781 | ||||
smd_T04A11.8 | 25832 | 27304 | ||||
smd_T20H12.2:2_14 | 38252 | 39179 | ||||
smd_W07E6.6:2_14 | 37661 | 39179 | ||||
smd_Y45F10D.1:2_14 | 37979 | 39036 | ||||
smd_Y45F10D.1_16 | 38121 | 39156 | ||||
smd_Y47H9C.3:2_14 | 38252 | 39179 | ||||
smd_Y48G10A.a_14 | 37661 | 39179 | ||||
smd_Y6B3B.8_14 | 38252 | 39179 | ||||
smd_ZC247.4_15 | 37807 | 38972 | ||||
smd_ZK218.2_16 | 38121 | 39156 | ||||
smd_ZK262.5_16 | 38121 | 39156 | ||||
Allele (312) | ||||||
Oligo_set | Aff_C25G4.10 | 1677 | 2369 | |||
Aff_T04A11.1 | 3755 | 2790 | ||||
Aff_T04A11.10 | 34475 | 35179 | ||||
Aff_T04A11.2 | 6013 | 4853 | ||||
Aff_T04A11.6 | 21877 | 22620 | ||||
Aff_T04A11.7 | 24503 | 25324 | ||||
Aff_T04A11.8 | 26822 | 27893 | ||||
Aff_T04A11.9 | 30844 | 31535 | ||||
Feature_object (83) | ||||||
Feature_data | T04A11:Polysome | 1 | 39283 | |||
T04A11:TranscriptionallyActiveRegion | 1 | 39283 | ||||
T04A11:ChIPSeqTF | 1 | 39283 | ||||
T04A11:TRF | 1 | 39283 | ||||
T04A11:Dust | 1 | 39283 | ||||
T04A11:inverted | 1 | 39283 | ||||
Homol_data | T04A11:RNAi | 1 | 39283 | |||
T04A11:SAGE | 1 | 39283 | ||||
T04A11:Mass-spec | 1 | 39283 | ||||
T04A11:BLAT_ncRNA | 1 | 39283 | ||||
T04A11:Expr | 1 | 39283 | ||||
T04A11:wublastx_brenneri | 1 | 39283 | ||||
T04A11:wublastx_briggsae | 1 | 39283 | ||||
T04A11:wublastx_brugia | 1 | 39283 | ||||
T04A11:wublastx_fly | 1 | 39283 | ||||
T04A11:wublastx_human | 1 | 39283 | ||||
T04A11:wublastx_japonica | 1 | 39283 | ||||
T04A11:wublastx_ovolvulus | 1 | 39283 | ||||
T04A11:wublastx_pristionchus | 1 | 39283 | ||||
T04A11:wublastx_remanei | 1 | 39283 | ||||
T04A11:wublastx_slimSwissProt | 1 | 39283 | ||||
T04A11:wublastx_sratti | 1 | 39283 | ||||
T04A11:wublastx_tmuris | 1 | 39283 | ||||
T04A11:wublastx_worm | 1 | 39283 | ||||
T04A11:wublastx_yeast | 1 | 39283 | ||||
T04A11:RepeatMasker | 1 | 39283 | ||||
Structure | From | Source | CHROMOSOME_IV | |||
Overlap_right | F53B2 | 39183 | ||||
Overlap_left | C25G4 | |||||
Clone_left_end | F53B2 | 32199 | ||||
DB_info | Database | EMBL | NDB_AC | Z83123 | ||
NDB_SV | Z83123.1 | |||||
Keyword | HTG | |||||
EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
Origin | From_author | Barlow K | ||||
From_laboratory | HX | |||||
Date_directory | 970630 | |||||
Species | Caenorhabditis elegans | |||||
Strain | WBStrain00000001 | |||||
Visible | Clone | T04A11 | ||||
Properties | Genomic_canonical | |||||
Checksum | MD5 | 6a86011901a37be70cd8b84619899450 | ||||
Status | Finished | 30 Jun 1997 00:00:00 | ||||
Submitted | 27 Nov 1996 00:00:00 | |||||
Annotated | 23 Jul 1997 00:00:00 | |||||
Map | Sequence-IV | Ends | Left | 6470 | ||
Right | 6493 | |||||
Interpolated_map_position | IV | 5.98699 | ||||
Assembly_tags | Finished Left | 1 | 4 | |||
Clone left end | 1 | 4 | T04A11 clone left | |||
32199 | 32202 | F53B2 clone left | ||||
39280 | 39283 | T04A11 clone right | ||||
annotation | 11869 | 11876 | ||||
Finished Right | 39280 | 39283 | ||||
Method | Genomic_canonical |