WormBase Tree Display for Sequence: T27F7

T27F7 DNA: T27F7 34960
  SMap: S_child: Gene_child (11)
      CDS_child: T27F7.1 33640 34896
        T27F7.2a 12177 28147
        T27F7.2a:wp227 12177 28147
        T27F7.2b 12276 28147
        T27F7.2b:wp227 12276 28147
        T27F7.2c 24493 27558
        T27F7.3 32971 30474
        T27F7.3a:wp212 32497 31007
        T27F7.4 32497 31007
        T27F7.12 29828 30018
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g2n11_x10_II_m 32497 31010
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g110n11_x10_II_p 24493 28144
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g16n11_x10_II_p 33637 34893
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g136_x10_II_p 12276 17963
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g14n11_x10_II_m 32888 30477
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g133n11_x10_II_p 17826 22988
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_gT27F7.3a 32497 31010
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g9n11_x10_II_m 32971 30477
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g2n11_x10_II_m 32497 32297
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g39n11_x10_II_p 33637 34893
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g162_x10_II_p 12308 13261
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g146_x10_II_p 15185 28144
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_gT27F7.3a 32497 31010
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g3n11_x10_II_m 32497 32279
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g14n11_x10_II_m 32971 30477
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g127_x10_II_p 33637 34893
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g107_x10_II_p 13413 28144
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g3n11_x10_II_m 32971 30477
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g110_x10_II_p 27301 27357
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g76_x10_II_p 26462 26749
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g148_x10_II_p 27409 28078
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_gT27F7.3a 32497 31010
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g1n11_x10_II_m 32497 32294
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g149_x10_II_p 27049 27102
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g124_x10_II_p 33637 34893
        RNASEQ_embryo_him-8_20dC_post-L1_g103_x10_II_p 13413 28144
        RNASEQ_embryo_him-8_20dC_post-L1_g120_x10_II_p 33637 34893
        RNASEQ_embryo_him-8_20dC_post-L1_g85n11_x10_II_p 15185 15241
        RNASEQ_embryo_him-8_20dC_post-L1_gT27F7.3a 32497 31010
        RNASEQ_embryo_him-8_20dC_post-L1_g8n11_x10_II_m 32971 30477
        RNASEQ_embryo_him-8_20dC_post-L1_g2n11_x10_II_m 32497 32087
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g26n11_x10_II_m 32971 30477
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g100_x10_II_p 33637 34893
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_gT27F7.3a 32497 31010
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g2n11_x10_II_m 32497 32177
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g88_x10_II_p 12177 22988
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g83n11_x10_II_p 24493 28144
        RNASEQ_L4_soma_JK1107_no_DNaseI_g6n11_x10_II_m 32497 32306
        RNASEQ_L4_soma_JK1107_no_DNaseI_g153n11_x10_II_p 12276 13409
        RNASEQ_L4_soma_JK1107_no_DNaseI_g139n11_x10_II_m 32971 31513
        RNASEQ_L4_soma_JK1107_no_DNaseI_g24n11_x10_II_m 30862 30477
        RNASEQ_L4_soma_JK1107_no_DNaseI_g170_x10_II_p 24493 28144
        RNASEQ_L4_soma_JK1107_no_DNaseI_g23n11_x10_II_m 30399 30211
        RNASEQ_L4_soma_JK1107_no_DNaseI_gT27F7.3a 32497 31010
        RNASEQ_L4_soma_JK1107_no_DNaseI_g199_x10_II_p 13112 13412
        RNASEQ_L4_soma_JK1107_no_DNaseI_g156_x10_II_p 15185 15238
        RNASEQ_L4_soma_JK1107_no_DNaseI_g26n11_x10_II_p 33637 34893
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g95_x10_II_p 13413 22988
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g11n11_x10_II_m 32971 30477
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g104_x10_II_p 30276 30521
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g58n11_x10_II_p 24493 28144
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g25n11_x10_II_p 33637 34893
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g1n11_x10_II_m 32497 32084
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g1n11s3k60_x10_II_m 32497 31010
        RNASEQ_early_embryo_g28n11_x10_II_p 24493 28144
        RNASEQ_early_embryo_g17n11_x10_II_p 33637 34893
        RNASEQ_early_embryo_g5n11_x10_II_m 32971 30477
        RNASEQ_early_embryo_g2n11e3k72_x10_II_m 32690 32622
        RNASEQ_early_embryo_g2n11_x10_II_m 32497 31010
        RNASEQ_early_embryo_g65n11_x10_II_p 12276 22988
        RNASEQ_early_embryo_g3e4k72_x10_II_m 33282 32701
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g50n11_x10_II_p 15185 22988
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g16n11m5_x10_II_p 27265 27555
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g5n11_x10_II_m 32971 30477
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g2n11e3k116_x10_II_m 32690 32577
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g2n11_x10_II_m 32497 31010
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g138_x10_II_p 33637 34893
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g148_x10_II_p 29667 29741
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g16n11_x10_II_p 24493 28144
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g56n11_x10_II_p 12276 15241
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g2e4k50_x10_II_m 33282 32701
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g121_x10_II_p 12276 28144
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g20n11_x10_II_p 33637 34893
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g6n11_x10_II_m 32971 30477
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g2_x10_II_m 32497 31010
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g14n11_x10_II_m 32971 30761
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g12n11s3k67_x10_II_m 30868 30477
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g6n11_x10_II_m 32497 31010
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g114_x10_II_p 33637 34893
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g122_x10_II_p 12276 28144
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g14n11_x10_II_m 32971 30477
        RNASEQ_mid-L3_25dC_25hrs_post-L1_gT27F7.3a 32497 31010
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g103_x10_II_p 33637 34893
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g11n11_x10_II_m 30399 30253
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g93n11_x10_II_p 24493 28144
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g120_x10_II_p 12276 17891
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g5_x10_II_m 32497 31397
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g141_x10_II_p 26741 27414
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g24n11_x10_II_p 33637 34893
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g5n11_x10_II_m 32497 31394
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g14n11_x10_II_m 32971 30477
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g181_x10_II_p 15185 17960
        RNASEQ_mid-L4_25dC_36hrs_post-L1_gT27F7.3a 32497 31010
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g146n11_x10_II_p 24493 26587
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g173_x10_II_p 12276 13451
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g107n11_x10_II_p 24493 25618
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_gT27F7.3a 32497 31010
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g2n11_x10_II_m 32497 31076
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g104n11_x10_II_m 31489 31076
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g1_x10_II_m 32497 31073
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g103n11_x10_II_p 26462 28144
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g183_x10_II_p 12321 13361
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g106_x10_II_p 33637 34893
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g156_x10_II_p 13413 17936
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g45n11_x10_II_m 32971 30477
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g101n11_x10_II_p 24493 28144
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g174_x10_II_p 12324 13268
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g122_x10_II_p 13413 17951
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_gT27F7.3a 32497 31010
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g2n11_x10_II_m 32497 31016
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g103_x10_II_p 33637 34893
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g33n11_x10_II_m 32971 30477
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g5n11_x10_II_p 33637 34893
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g106n11_x10_II_p 24493 28144
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g18n11_x10_II_m 32888 30477
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g14n11_x10_II_m 32497 31010
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g125_x10_II_p 12276 17963
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g15n11_x10_II_m 30399 30223
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g87_x10_II_p 33637 34893
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g24n11_x10_II_m 32888 30477
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g117n11_x10_II_p 24493 28144
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g14n11_x10_II_m 32497 32222
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g133_x10_II_p 12276 22988
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_gT27F7.3a 32497 31010
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g2_x10_II_m 32497 31025
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g9n11_x10_II_m 32971 30477
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g19n11_x10_II_p 33637 34893
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_gT27F7.3a 32497 31010
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g110_x10_II_p 12276 15241
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g109n11_x10_II_p 24493 28144
        T27F7.gc1 12177 30018
        T27F7.gc2 32497 31007
        T27F7.gc3 32971 32681
        T27F7.gc4 33640 34845
        ContigII.elegans.jigsaw.1324.mRNA1324 12138 28356
        ContigII.elegans.jigsaw.1326.mRNA1326 33027 30761
        ContigII.elegans.jigsaw.1325.mRNA1325 29158 29971
        AG1201_T27F7.2.T10 12177 28147
        AG1201_T27F7.2.T12 12276 28147
        AG1201_T27F7.2.T11 12276 29202
        AG1201_T27F7.2.T9 15185 28147
        AG1201_T27F7.2.T8 17826 28147
        AG1201_RIT2M.1867.T1 23919 23586
        AG1201_T27F7.2.T5 24493 28147
        AG1201_T27F7.2.T3 26462 28147
        AG1201_T27F7.2.T1 29271 29820
        AG1201_T27F7.3.T7 30399 30208
        AG1201_T27F7.3.T8 32888 30474
        AG1201_T27F7.3.T9 32947 30474
        AG1201_T27F7.3.T10 32971 30474
        AG1201_T27F7.3.T5 32971 30755
        AG1201_RIT2M.1982.T1 32497 31007
        AG1201_T27F7.3.T1 32497 31988
        AG1201_T27F7.3.T3 33000 32786
        AG1201_T27F7.3.T4 33282 32789
        AG1201_T27F7.1.T1 33637 34896
      Transcript (16)
      PCR_product (12)
      Allele (441)
      Oligo_set: Aff_T27F7.1 33604 34301
        Aff_T27F7.2 26720 28147
        Aff_T27F7.3 32437 30755
        Aff_F59A6.7 34639 34896
      Feature_object (243)
      Feature_data: T27F7:Polysome 1 34960
        T27F7:TranscriptionallyActiveRegion 1 34960
        T27F7:ChIPSeqTF 1 34960
        T27F7:TRF 1 34960
        T27F7:Dust 1 34960
        T27F7:inverted 1 34960
      Homol_data (20)
  Structure: From: Source: CHROMOSOME_II
    Overlap_right: F59A6 34461
    Overlap_left: Y38A8
    Clone_left_end: T27F7 197
      F59A6 34461
  DB_info: Database: EMBL NDB_AC FO081509
        NDB_ID _U58762
        NDB_SV FO081509.2
    Secondary_accession: U58762
    DB_remark: The 5' clone is Y38A8, 200 bp overlap; the 3' clone is F59A6, 500 bp overlap. Actual start of this clone is at base position 197 of T27F7; actual end is at 2740 of F59A6.
      [121025] Sequence correction: SNP 0 bases @ 4010
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Hallsworth K
      Wilson RK
    From_laboratory: RW
    Date: 29 Feb 1996 00:00:00
    Date_directory: 960227
    Species: Caenorhabditis elegans
  Visible: Clone: T27F7
  Properties: Genomic_canonical
    Checksum: MD5: 1dd528a83244ad38f68e85de7697c5d4
    Status: Shotgun
      Finished
      Submitted: 29 Feb 1996 00:00:00
  Map: Sequence-II
  Interpolated_map_position: II -2.60895
  Method: Genomic_canonical