WormBase Tree Display for Sequence: R07C12

R07C12 DNA: R07C12 9753
  SMap: S_child: Gene_child: WBGene00019933 710 2690
        WBGene00019931 8082 9703
        WBGene00019934 6198 7877
        WBGene00305554 4648 8930
        WBGene00019932 3767 5681
      CDS_child: R07C12.1 8173 9655
        R07C12.2:wp97 3158 5681
        R07C12.2:wp245 4486 5681
        R07C12.3 710 2690
        R07C12.3:wp229 177 2883
        R07C12.4:wp239 6379 7877
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g137_x9_IV_p 8835 8930
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g117_x9_IV_p 9091 9217
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g79_x9_IV_p 4649 5672
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g52_x9_IV_p 4486 4752
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g94_x9_IV_p 7522 7713
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g93_x9_IV_p 4579 4792
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g74_x9_IV_p 5197 5660
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g38n11_x9_IV_p 8811 9652
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g94_x9_IV_p 1930 2312
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g55_x9_IV_p 4486 5678
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g32_x9_IV_p 8811 9652
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g73_x9_IV_p 4892 5187
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g58_x9_IV_p 5197 5657
        RNASEQ_embryo_him-8_20dC_post-L1_g95_x9_IV_p 4670 4792
        RNASEQ_embryo_him-8_20dC_post-L1_g78_x9_IV_p 5197 5654
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g169_x9_IV_p 2542 2607
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g165_x9_IV_p 836 1869
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g60_x9_IV_p 8811 9652
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g68_x9_IV_p 8254 8588
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g49n11e6k75_x9_IV_p 5143 5331
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g81_x9_IV_p 7729 7874
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g210_x9_IV_p 6429 6590
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g19n11_x9_IV_p 4486 4752
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g147_x9_IV_p 2316 2514
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g49n11_x9_IV_p 4649 5678
        RNASEQ_L4_soma_JK1107_no_DNaseI_g40_x9_IV_p 4486 5678
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g85_x9_IV_p 8883 9125
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g111_x9_IV_p 7729 7794
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g54_x9_IV_p 4486 5672
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g88_x9_IV_p 8383 8588
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g108_x9_IV_p 9507 9652
        RNASEQ_early_embryo_g72_x9_IV_p 4486 5678
        RNASEQ_early_embryo_g95_x9_IV_p 9520 9573
        RNASEQ_early_embryo_g157_x9_IV_p 8446 8573
        RNASEQ_early_embryo_g101_x9_IV_p 7771 7874
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g131_x9_IV_p 8446 8576
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g52_x9_IV_p 4486 5678
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g117_x9_IV_p 9218 9268
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g100_x9_IV_p 8335 8585
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g72_x9_IV_p 7729 7874
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g25n11_x9_IV_p 4486 5678
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g64n11_x9_IV_p 6267 6593
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g114_x9_IV_p 8901 9089
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g69_x9_IV_p 8326 8585
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g81_x9_IV_p 7729 7874
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g62_x9_IV_p 8811 9572
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g120_x9_IV_p 6429 6581
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g22n11_x9_IV_p 4486 5678
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g115_x9_IV_p 6438 6584
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g9n11_x9_IV_p 4486 5678
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g96_x9_IV_p 8410 8573
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g134_x9_IV_p 8428 8525
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g123_x9_IV_p 9507 9572
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g10n11_x9_IV_p 4486 5678
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g92_x9_IV_p 9196 9470
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g145_x9_IV_p 8904 9047
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g105_x9_IV_p 9549 9652
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g122_x9_IV_p 8886 8930
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g187_x9_IV_p 8446 8540
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g61_x9_IV_p 4486 5678
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g59_x9_IV_p 4486 5660
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g25_x9_IV_p 4486 5660
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g93m1_x9_IV_p 3865 3969
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g93_x9_IV_p 3774 4099
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g40s5k56_x9_IV_p 5197 5257
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g40_x9_IV_p 4486 5675
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g99_x9_IV_p 8254 8594
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g88_x9_IV_p 9507 9652
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g39_x9_IV_p 4486 5675
        R07C12.gc1 710 2690
        R07C12.gc2 3158 7877
        R07C12.gc3 8173 9655
        ContigIV.elegans.jigsaw.664.mRNA664 8173 9699
        ContigIV.elegans.jigsaw.663.mRNA663 6109 7951
        ContigIV.elegans.jigsaw.661.mRNA661 549 2915
        ContigIV.elegans.jigsaw.662.mRNA662 3379 5723
        AG1201_R07C12.3.T2 710 2519
        AG1201_R07C12.3.T1 710 2660
        AG1201_R07C12.3.T3 2542 2610
        AG1201_R07C12.2.T1 4486 4755
        AG1201_R07C12.2.T3 4486 5681
        AG1201_R07C12.2.T2 5197 5681
        AG1201_R07C12.4.T5 6228 7596
        AG1201_R07C12.4.T2 6379 7877
        AG1201_R07C12.4.T3 6379 7877
        AG1201_R07C12.4.T4 6379 7877
        AG1201_R07C12.4.T1 7729 7877
        AG1201_K08D10.10.T10 8173 8966
        AG1201_K08D10.10.T8 8173 9578
        AG1201_K08D10.10.T6 8173 9655
        AG1201_K08D10.10.T5 8811 9655
      Transcript: R07C12.5 4648 8930
        R07C12.1.1 8082 9703
        R07C12.3.1 710 2690
      Pseudogene: R07C12.2 3767 5681
        R07C12.4 6198 7877
      PCR_product (11)
      Allele (133)
      Oligo_set: Aff_R07C12.1 8736 9655
        Aff_R07C12.2 6674 7877
        Aff_R07C12.3 1915 2883
      Feature_object (54)
      Feature_data: R07C12:Polysome 1 9753
        R07C12:TranscriptionallyActiveRegion 1 9753
        R07C12:ChIPSeqTF 1 9753
        R07C12:Dust 1 9753
        R07C12:inverted 1 9753
      Homol_data: R07C12:RNAi 1 9753
        R07C12:SAGE 1 9753
        R07C12:wublastx_brenneri 1 9753
        R07C12:wublastx_briggsae 1 9753
        R07C12:wublastx_remanei 1 9753
        R07C12:wublastx_worm 1 9753
        R07C12:RepeatMasker 1 9753
  Structure: From: Source: CHROMOSOME_IV
    Overlap_right: K08D10 9554
    Overlap_left: F49F1
    Clone_left_end: K08D10 9554
    Clone_right_end: F49F1 1200
  DB_info: Database: EMBL NDB_AC FO081429
        NDB_ID _AF038622
        NDB_SV FO081429.1
    Secondary_accession: AF038622
    DB_remark: The 5' clone is F49F1, 1200 bp overlap; the 3' clone is K08D10, 200 bp overlap. Actual start of this clone is at base position 18996 of F49F1; actual end is at 11832 of K08D10.
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Geisel C
      Beck C
      O'Brien D
    From_laboratory: RW
    Date: 13 Oct 1997 00:00:00
    Date_directory
    Species: Caenorhabditis elegans
  Visible: Clone: R07C12
  Properties: Genomic_canonical
    Checksum: MD5: bc76b96a2036284580e46f4fc582ced2
    Status (2)
  Map: Sequence-IV
  Interpolated_map_position: IV -0.638288
  Method: Genomic_canonical