WormBase Tree Display for Sequence: R04F11

R04F11 DNA: R04F11 32975
  SMap: S_child: Gene_child (29)
      CDS_child: R04F11.1 2357 864
        R04F11.1:wp156 3153 1041
        R04F11.2 10642 12010
        R04F11.3 9195 7140
        R04F11.3:wp67 9965 7140
        R04F11.4:wp77 17254 12575
        R04F11.4a 24132 12575
        R04F11.4b 20445 12575
        R04F11.4c 29757 12575
        R04F11.4d 28720 12575
        R04F11.5 10034 9389
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g19n11_x25_V_m 9195 7143
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g166_x25_V_m 1178 1089
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g49n11_x25_V_m 10034 9392
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g69_x25_V_p 10642 12007
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g148_x25_V_m 17218 16758
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g17n11_x25_V_m 9195 7143
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g131_x25_V_m 15323 12835
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g207_x25_V_m 16751 16681
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g1n11_x25_V_p 10642 12007
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g148_x25_V_m 2027 1388
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g111n11_x25_V_m 24132 15403
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g25n11_x25_V_m 10034 9392
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g103_x25_V_m 1178 867
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g127_x25_V_m 12777 12578
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g228_x25_V_m 29712 27861
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g46n11_x25_V_m 9195 7143
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g184_x25_V_m 27869 16547
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g168_x25_V_m 2203 2093
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g59n11_x25_V_m 10034 9392
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g143_x25_V_m 15314 12940
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g103n11_x25_V_m 24132 16544
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g274_x25_V_m 29752 29663
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g146_x25_V_m 1178 879
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g169_x25_V_m 12777 12578
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g3n11_x25_V_p 10642 12007
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g113_x25_V_m 16525 15403
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g246_x25_V_m 2027 1388
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g219_x25_V_m 15456 15351
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g117_x25_V_m 2357 1947
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g140_x25_V_m 1178 867
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g96_x25_V_m 8262 7227
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g37n11_x25_V_m 9195 8947
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g167_x25_V_m 13944 13051
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g19_x25_V_p 10642 12007
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g38n11_x25_V_m 10034 9476
        RNASEQ_embryo_him-8_20dC_post-L1_g2n11_x25_V_p 10642 12007
        RNASEQ_embryo_him-8_20dC_post-L1_g148_x25_V_m 16483 15466
        RNASEQ_embryo_him-8_20dC_post-L1_g127_x25_V_m 20274 18524
        RNASEQ_embryo_him-8_20dC_post-L1_g12n11_x25_V_m 9195 7143
        RNASEQ_embryo_him-8_20dC_post-L1_g70_x25_V_m 9787 9392
        RNASEQ_embryo_him-8_20dC_post-L1_g196_x25_V_m 14497 14381
        RNASEQ_embryo_him-8_20dC_post-L1_g32n11_x25_V_m 10034 9851
        RNASEQ_embryo_him-8_20dC_post-L1_g131_x25_V_m 12682 12635
        RNASEQ_embryo_him-8_20dC_post-L1_g140_x25_V_m 13944 12925
        RNASEQ_embryo_him-8_20dC_post-L1_g114_x25_V_m 17233 16779
        RNASEQ_embryo_him-8_20dC_post-L1_g213_x25_V_m 15233 15081
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g180_x25_V_m 2027 1923
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g174_x25_V_m 1399 867
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g210_x25_V_m 20322 18575
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g53n11_x25_V_m 10034 9392
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g136_x25_V_m 16751 15475
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g188_x25_V_m 13944 12617
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g173_x25_V_m 15323 14105
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g16n11_x25_V_m 9195 7143
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g1n11_x25_V_p 10642 12007
        RNASEQ_L4_soma_JK1107_no_DNaseI_g253_x25_V_m 12777 12662
        RNASEQ_L4_soma_JK1107_no_DNaseI_g127_x25_V_m 1178 1095
        RNASEQ_L4_soma_JK1107_no_DNaseI_g45n11_x25_V_m 10034 9392
        RNASEQ_L4_soma_JK1107_no_DNaseI_g1n11_x25_V_p 10642 12007
        RNASEQ_L4_soma_JK1107_no_DNaseI_g48n11_x25_V_m 9195 7143
        RNASEQ_L4_soma_JK1107_no_DNaseI_g202_x25_V_m 2330 2162
        RNASEQ_L4_soma_JK1107_no_DNaseI_g265_x25_V_m 1964 1436
        RNASEQ_L4_soma_JK1107_no_DNaseI_g290_x25_V_m 29712 27918
        RNASEQ_L4_soma_JK1107_no_DNaseI_g258_x25_V_m 1085 897
        RNASEQ_L4_soma_JK1107_no_DNaseI_g108_x25_V_m 20445 16681
        RNASEQ_L4_soma_JK1107_no_DNaseI_g70n11_x25_V_m 24132 24092
        RNASEQ_L4_soma_JK1107_no_DNaseI_g135_x25_V_m 13944 12964
        RNASEQ_L4_soma_JK1107_no_DNaseI_g107_x25_V_m 16751 14084
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g127_x25_V_m 16751 14409
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g139_x25_V_m 12777 12578
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g33n11_x25_V_m 10034 9392
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g128n11_x25_V_m 24132 16681
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g40n11_x25_V_m 9195 7143
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g129_x25_V_m 13944 12895
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g122_x25_V_m 2027 867
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g133_x25_V_m 27869 14412
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g1n11_x25_V_p 10642 12007
        RNASEQ_early_embryo_g122_x25_V_m 1178 897
        RNASEQ_early_embryo_g120_x25_V_m 16751 12578
        RNASEQ_early_embryo_g54n11_x25_V_m 10034 9392
        RNASEQ_early_embryo_g1n11_x25t1_V_p 10642 12007
        RNASEQ_early_embryo_g151_x25_V_m 1940 1403
        RNASEQ_early_embryo_g82_x25_V_m 20445 16681
        RNASEQ_early_embryo_g13n11_x25_V_m 9195 7143
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g71n11_x25_V_m 20445 12578
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g3n11_x25_V_p 10642 12007
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g99_x25_V_m 27869 27838
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g40n11_x25t1_V_m 9195 7143
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g142_x25_V_m 1399 957
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g70n11_x25t1_V_m 10034 9392
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g45n11_x25_V_m 9195 7143
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g137_x25_V_m 29712 27840
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g104n11_x25_V_m 20445 12578
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g207n11_x25_V_m 16625 16484
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g2n11_x25_V_p 10642 12007
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g141_x25_V_m 2027 867
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g48n11_x25_V_m 10034 9392
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g87n11_x25_V_m 15518 12578
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g31n11_x25_V_m 9195 7143
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g78n11_x25_V_m 20445 16198
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g125_x25_V_m 2027 867
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g51n11_x25t1_V_m 10034 9392
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g1n11_x25_V_p 10642 12007
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g39n11_x25t1_V_m 10034 9392
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g36n11_x25_V_m 9195 7143
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g2n11_x25t1_V_p 10642 12007
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g114_x25_V_m 16751 14381
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g176_x25_V_m 1399 1095
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g108_x25_V_m 14387 12578
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g200_x25_V_m 1940 1475
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g1n11_x25t1_V_p 10642 12007
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g169_x25_V_m 15323 15129
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g213_x25_V_m 1997 1448
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g37n11_x25_V_m 10034 9392
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g128_x25_V_m 16751 15436
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g29n11_x25_V_m 9195 7143
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g118_x25_V_m 20253 18539
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g106_x25_V_m 14387 12578
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g191_x25_V_m 15106 14432
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g201_x25_V_m 1146 1045
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g235_x25_V_m 15104 14493
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g37n11_x25_V_m 10034 9392
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g20n11_x25_V_m 9195 7143
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g1n11_x25_V_p 10642 12007
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g232_x25_V_m 24114 18551
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g1n11_x25_V_p 10642 12007
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g215_x25_V_m 2115 2018
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g190_x25_V_m 17215 16821
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g12n11_x25_V_m 9195 7143
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g47n11_x25_V_m 10034 9392
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g213_x25_V_m 13944 12850
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g249_x25_V_m 14497 14381
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g259_x25_V_m 29737 29663
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g49n11_x25_V_m 10034 9392
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g41n11_x25_V_m 9195 7143
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g132_x25_V_m 16525 15451
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g142_x25_V_m 16751 16625
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g8n11_x25_V_p 10642 12007
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g222_x25_V_m 1157 921
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g235_x25_V_m 16525 15496
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g232_x25_V_m 18589 18536
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g23n11_x25_V_m 9195 7143
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g208_x25_V_m 16751 16565
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g159_x25_V_m 15323 15252
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g49n11_x25_V_m 10034 9392
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g1n11_x25_V_p 10642 12007
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g188_x25_V_m 1290 1166
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g198_x25_V_m 15233 14451
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g157_x25_V_m 18493 16755
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g125_x25_V_m 14387 13051
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g142_x25_V_m 16576 15436
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g25n11_x25t1_V_m 10034 9392
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g151_x25_V_m 15323 15228
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g1n11_x25t1_V_p 10642 12007
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g12n11_x25t1_V_m 9195 7143
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g171_x25_V_m 2115 2009
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g146_x25_V_m 16751 16589
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g147_x25_V_m 27860 18548
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g124_x25_V_m 12777 12578
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g182_x25_V_m 1305 1202
        R04F11.gc1 2357 864
        R04F11.gc2 9195 7140
        R04F11.gc3 10034 9389
        R04F11.gc4 10642 12010
        R04F11.gc5 20445 12575
        ContigV.elegans.jigsaw.3055.mRNA3055 9225 6934
        ContigV.elegans.jigsaw.3056.mRNA3056 10065 9293
        ContigV.elegans.jigsaw.3054.mRNA3054 2385 739
        ContigV.elegans.jigsaw.3057.mRNA3057 10642 12375
        ContigV.elegans.jigsaw.3058.mRNA3058 24205 10810
        AG1201_R04F11.1.T2 2357 864
        AG1201_R04F11.1.T5 2357 864
        AG1201_R04F11.1.T1 2357 938
        AG1201_R04F11.3.T4 9195 7140
        AG1201_R04F11.3.T8 9195 7140
        AG1201_R04F11.3.T1 9195 8248
        AG1201_R04F11.3.T2 9195 8248
        AG1201_R04F11.3.T3 9195 8248
        AG1201_R04F11.5.T2 9819 9389
        AG1201_R04F11.5.T1 10034 9389
        AG1201_R04F11.5.T3 10034 9389
        AG1201_R04F11.2.T9 10355 10603
        AG1201_R04F11.2.T10 10642 10692
        AG1201_R04F11.2.T11 10642 12010
        AG1201_R04F11.2.T2 11061 12010
        AG1201_R04F11.2.T1 11899 12120
        AG1201_R04F11.4.T7 15323 12575
        AG1201_R04F11.4.T11 16751 12575
        AG1201_R04F11.4.T8 20445 12575
        AG1201_R04F11.4.T13 24132 12575
        AG1201_R04F11.4.T12 28720 12575
        AG1201_R04F11.4.T10 29757 12575
        AG1201_R04F11.4.T2 20445 15426
        AG1201_R04F11.4.T3 20445 16120
        AG1201_R04F11.4.T1 18589 17150
      Transcript (34)
      PCR_product (16)
      Allele (441)
      Oligo_set: Aff_R04F11.1 2155 1041
        Aff_R04F11.2 10642 12010
        Aff_R04F11.3 8589 7140
        Aff_R04F11.4 14110 12575
      Feature_object (320)
      Feature_data: R04F11:Polysome 1 32975
        R04F11:TranscriptionallyActiveRegion 1 32975
        R04F11:ChIPSeqTF 1 32975
        R04F11:TRF 1 32975
        R04F11:Dust 1 32975
      Homol_data (18)
  Structure: From: Source: CHROMOSOME_V
    Overlap_right: F23H12 32861
    Overlap_left: C51F7
    Clone_left_end: R04F11 1
      F23H12 32861
    Clone_right_end: C51F7 29178
  DB_info: Database: EMBL NDB_AC Z74475
        NDB_SV Z74475.1
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Harris BR
    From_laboratory: HX
    Date_directory: 960313
    Species: Caenorhabditis elegans
    Strain: WBStrain00000001
  Visible: Clone: R04F11
  Properties: Genomic_canonical
    Checksum: MD5: dec5f82b17f62d673ea58ac2b0f93bf7
    Status: Finished: 13 Mar 1996 00:00:00
      Submitted: 20 Jun 1996 00:00:00
      Annotated: 18 Jun 1996 00:00:00
  Map: Sequence-V Ends: Left: 7011
        Right: 7039
  Interpolated_map_position: V 3.99941
  Assembly_tags: Finished Left 1 6
    Clone left end 1 6 R04F11
      32861 32864 F23H12
    Finished Right 32961 32975
    Clone right end 29175 29178 C51F7
  Method: Genomic_canonical