WormBase Tree Display for Sequence: K10H10

K10H10 DNA: K10H10 30033
  SMap: S_child: Gene_child (14)
      CDS_child: K10H10.1 1338 4095
        K10H10.2 5949 4481
        K10H10.3a 9556 11203
        K10H10.3c 10073 11203
        K10H10.3d 9730 11203
        K10H10.4:wp176 12316 13071
        K10H10.4a 12022 13071
        K10H10.4b 12316 13071
        K10H10.5 13280 14073
        K10H10.5:wp239 13409 14073
        K10H10.6 14827 16449
        K10H10.6:wp274 14827 16449
        K10H10.7 19161 18715
        K10H10.9 26636 24914
        K10H10.9:wp57 27006 24914
        K10H10.9:wp239 27006 24914
        K10H10.10a 19626 21692
        K10H10.10b 20012 21692
        K10H10.12 17774 16573
        K10H10.13 22819 21757
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g30n11_x29_II_m 5949 4484
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g33n11_x29_II_p 1655 4092
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g75n11_x29_II_p 1338 1727
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g76_x30_II_p 12022 12327
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g104_x30_II_m 17600 16698
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g119_x30_II_p 21438 21602
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g94_x30_II_p 20557 20784
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g90_x30_II_p 20015 20553
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g66_x29_II_p 1808 4092
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g81n11_x29_II_p 1338 1576
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g8n11_x29_II_m 5949 4484
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g57n11_x29_II_p 1338 4092
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g16n11_x29_II_m 5949 4484
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g40_x30_II_p 12022 13068
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g113_x30_II_p 20012 20613
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g94_x30_II_p 13675 14070
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g111_x30_II_p 20674 21599
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g44n11_x30_II_p 12316 12666
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g81_x30_II_p 13280 13653
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g58_x30_II_m 16662 16612
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g49_x30_II_m 17684 16663
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g5n11_x29_II_m 5949 4484
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g34n11_x29_II_p 1655 4092
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g83n11_x29_II_p 1338 1727
        RNASEQ_embryo_him-8_20dC_post-L1_g35n11_x29_II_p 10073 11056
        RNASEQ_embryo_him-8_20dC_post-L1_g42n11_x29_II_p 1338 4092
        RNASEQ_embryo_him-8_20dC_post-L1_g58_x30_II_p 12022 12552
        RNASEQ_embryo_him-8_20dC_post-L1_g48_x29_II_p 9556 10218
        RNASEQ_embryo_him-8_20dC_post-L1_g97_x30_II_p 12886 13005
        RNASEQ_embryo_him-8_20dC_post-L1_g9n11_x29_II_m 5949 4484
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g3n11_x29_II_m 5949 4484
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g68_x30_II_p 12316 12447
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g138_x30_II_m 21822 21769
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g130_x29_II_p 10867 11048
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g148_x30_II_p 20012 20733
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g3n11s1k83_x29_II_m 5170 4938
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g84_x30_II_p 12886 13068
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g50_x30_II_m 19161 18718
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g38n11_x29_II_p 1338 4092
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g165_x30_II_p 21438 21623
        RNASEQ_L4_soma_JK1107_no_DNaseI_g105_x29_II_p 9730 10174
        RNASEQ_L4_soma_JK1107_no_DNaseI_g15n11_x29_II_m 5949 4484
        RNASEQ_L4_soma_JK1107_no_DNaseI_g121_x29_II_p 10196 10667
        RNASEQ_L4_soma_JK1107_no_DNaseI_g44n11_x29_II_p 1338 4092
        RNASEQ_L4_soma_JK1107_no_DNaseI_g17s1k158_x30_II_p 12316 12666
        RNASEQ_L4_soma_JK1107_no_DNaseI_g123_x30_II_p 20870 21452
        RNASEQ_L4_soma_JK1107_no_DNaseI_g17_x30_II_p 12022 13068
        RNASEQ_L4_soma_JK1107_no_DNaseI_g163_x30_II_p 13409 13465
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g52n11_x29_II_p 1338 4092
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g113_x30_II_p 12316 12384
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g3n11_x29_II_m 5949 4484
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g52_x30_II_p 20012 21680
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g78_x30_II_m 21822 21760
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g62_x29_II_p 9730 11050
        RNASEQ_early_embryo_g90_x30_II_p 20746 20923
        RNASEQ_early_embryo_g77_x29_II_p 9730 10218
        RNASEQ_early_embryo_g89_x30_II_p 19716 19817
        RNASEQ_early_embryo_g68_x30_II_p 12316 13068
        RNASEQ_early_embryo_g83_x30_II_m 17717 17560
        RNASEQ_early_embryo_g171_x29_II_p 10073 11056
        RNASEQ_early_embryo_g20n11s1k83_x29_II_m 5170 4938
        RNASEQ_early_embryo_g59n11s1k362_x29_II_p 10566 10894
        RNASEQ_early_embryo_g55n11_x29_II_p 1338 4092
        RNASEQ_early_embryo_g20n11e2k119_x29_II_m 5172 4937
        RNASEQ_early_embryo_g171s2k209_x29_II_p 10707 10894
        RNASEQ_early_embryo_g20n11_x29_II_m 5949 4484
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g40_x30t1_II_p 12022 13068
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g75_x29_II_p 9730 10218
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g106_x29_II_p 10073 11056
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g55n11_x29_II_p 1338 4092
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g57n11_x29_II_p 1655 1711
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g6n11_x29_II_m 5949 4484
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g79_x30_II_p 20012 20616
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g63_x30_II_m 16662 16600
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g47_x29_II_p 1808 4092
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g77_x30_II_m 26636 24917
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g78_x30_II_p 20539 21614
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g79_x30_II_p 19626 20044
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g42n11_x29_II_p 1338 1450
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g5n11e2k304_x29_II_m 5172 4937
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g44_x30_II_m 17774 16576
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g5n11_x29_II_m 5949 4484
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g89_x29_II_p 9730 11059
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g8_x30_II_p 12022 12666
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g46n11_x29_II_p 1338 4092
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g128_x29_II_p 10525 10643
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g73_x30_II_p 19626 21689
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g10n11_x29_II_m 5949 4484
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g8m2_x30_II_p 12308 12702
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g39n11_x30_II_p 12316 13068
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g38n11m1_x30_II_p 12316 12702
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g4n11_x29_II_m 5949 4484
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g4n11m2_x29_II_m 5172 4937
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g83_x30_II_p 20674 21602
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g46e2k69_x30_II_p 12308 12702
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g103_x29_II_p 10707 11050
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g111_x30_II_p 19689 19936
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g4n11m1_x29_II_m 5949 5158
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g85_x30_II_p 20015 20616
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g123_x29_II_p 10139 10628
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g76_x30_II_m 17774 16576
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g39n11_x29_II_p 1338 4092
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g25n11_x30_II_p 12316 13068
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g46_x30_II_p 12022 12666
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g141_x30_II_p 19818 19918
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g14n11_x29_II_m 5949 4484
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g60_x29_II_p 1463 3363
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g69_x30_II_m 19161 18724
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g62_x30_II_p 12022 13068
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g92_x29_II_p 3508 4092
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g152_x29_II_p 10151 10503
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g40n11_x29_II_p 1338 4092
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g30n11_x29_II_m 5949 4487
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g141_x29_II_p 10893 11032
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g31n11_x29_II_m 5949 4484
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g138_x29_II_p 10199 10518
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g51n11_x29_II_p 1338 4092
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g64n11_x29_II_p 1338 3351
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g119_x30_II_p 12662 12832
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g27n11_x29_II_m 5949 4490
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g89_x29_II_p 3508 4092
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g80_x30_II_p 12022 12339
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g149_x30_II_p 20044 20615
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g53n11_x29_II_p 1338 4092
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g128_x29_II_p 10510 10563
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g78_x30_II_p 12022 12354
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g48n11_x29_II_m 5949 4484
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g129_x30_II_p 20942 21539
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g155_x30_II_p 13717 13818
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g20n11e2k80_x29_II_m 5172 4937
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g20n11_x29_II_m 5949 4484
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g40n11_x29_II_p 1338 4092
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g98_x30_II_m 17538 16750
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g118_x30_II_p 20818 20968
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g64_x30_II_p 12022 13068
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g123_x30_II_p 20542 20703
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g77_x30_II_m 18966 18778
        K10H10.gc1 1338 4095
        K10H10.gc2 5949 4481
        K10H10.gc3 9556 11203
        K10H10.gc4 12022 13071
        K10H10.gc5 13280 14073
        K10H10.gc6 14737 16449
        K10H10.gc7 19161 16573
        K10H10.gc8 19626 21692
        K10H10.gc9 27071 21757
        ContigII.elegans.jigsaw.3451.mRNA3451 19191 18620
        ContigII.elegans.jigsaw.3447.mRNA3447 11802 13194
        ContigII.elegans.jigsaw.3444.mRNA3444 1202 4419
        ContigII.elegans.jigsaw.3449.mRNA3449 14762 18259
        ContigII.elegans.jigsaw.3448.mRNA3448 13342 14137
        ContigII.elegans.jigsaw.3445.mRNA3445 6131 4404
        ContigII.elegans.jigsaw.3450.mRNA3450 17851 16546
        ContigII.elegans.jigsaw.3446.mRNA3446 9556 11287
        ContigII.elegans.jigsaw.3452.mRNA3452 19041 21741
        AG1201_K10H10.1.T1 1338 4095
        AG1201_K10H10.1.T6 1655 4095
        AG1201_K10H10.1.T7 1655 4095
        AG1201_K10H10.2.T1 5949 4481
        AG1201_K10H10.3.T4 9553 11203
        AG1201_K10H10.3.T1 10073 11203
        AG1201_K10H10.3.T2 10566 11203
        AG1201_K10H10.3.T3 10707 11203
        AG1201_K10H10.4.T2 12022 13071
        AG1201_K10H10.4.T1 12316 13071
        AG1201_RIT2M.722.T1 13211 12927
        AG1201_K10H10.5.T1 13280 14073
        AG1201_K10H10.6.T1 15811 16449
        AG1201_K10H10.12.T3 17774 16573
        AG1201_K10H10.12.T2 17774 17611
        AG1201_K10H10.12.T1 17774 17622
        AG1201_K10H10.7.T1 19161 18715
        AG1201_RIT2P.2151.T1 18935 19099
        AG1201_K10H10.10.T1 19626 20817
        AG1201_K10H10.10.T2 19626 21692
        AG1201_K10H10.13.T1 22819 21757
        AG1201_K10H10.9.T1 26636 24914
      Transcript (19)
      PCR_product (31)
      Allele (745)
      Oligo_set: Aff_K10H10.1 3313 4095
        Aff_K10H10.2 5535 4481
        Aff_K10H10.3 10507 11203
        Aff_K10H10.4 12361 13071
        Aff_K10H10.5 13409 14073
        Aff_K10H10.6 15737 16449
        Aff_K10H10.7 19161 18715
        Aff_K10H10.9 26658 24914
      Feature_object (319)
      Feature_data: K10H10:Polysome 1 30033
        K10H10:TranscriptionallyActiveRegion 1 30033
        K10H10:ChIPSeqTF 1 30033
        K10H10:TRF 1 30033
        K10H10:Dust 1 30033
        K10H10:inverted 1 30033
      Homol_data (19)
  Structure: From: Source: CHROMOSOME_II
    Overlap_right: F57C2 29930
    Overlap_left: C13B4
    Clone_left_end: K10H10 1
      F57C2 29930
    Clone_right_end: C13B4 19748
  DB_info: Database: EMBL NDB_AC Z83236
        NDB_SV Z83236.1
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Percy CM
    From_laboratory: HX
    Date_directory: 961029
    Species: Caenorhabditis elegans
    Strain: WBStrain00000001
  Visible: Clone: K10H10
  Properties: Genomic_canonical
    Checksum: MD5: ecf33d3203e6bc8e56152c91f29a5c42
    Status: Finished: 29 Oct 1996 00:00:00
      Submitted: 09 Dec 1996 00:00:00
      Annotated: 01 Jan 1980 00:00:00
  Map: Sequence-II Ends: Left: 8292
        Right: 8321
  Interpolated_map_position: II 23.0386
  Assembly_tags: Finished Left 1 1
    Clone left end 1 4
      29930 29933 F57C2
    annotation 13115 13115 ambiguous base consensus is a T but some trace call a G and one calls an A
      18781 18781
      29254 29254 this clone has possible base point mutation of a T to a G
    Clone right end 19745 19748 C13B4
    Finished Right 30033 30033
  Method: Genomic_canonical