WormBase Tree Display for Sequence: F56E3

F56E3 DNA: F56E3 32816
  SMap: S_child: Gene_child (17)
      CDS_child: F56E3.1:wp57 27666 27948
        F56E3.3a 7097 137
        F56E3.3a:wp271 7097 137
        F56E3.3b 7097 137
        F56E3.3b:wp271 7097 137
        F56E3.3c:wp271 7097 137
        F56E3.4a 27724 25802
        F56E3.4b 27724 24742
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g53_x7_X_m 5020 251
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g43n11_x7_X_m 7097 1020
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g24n11_x7_X_m 581 552
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g5n11_x7_X_m 16814 15870
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g85_x7_X_p 30715 31206
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g35n11_x7_X_p 28899 29729
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g16n11_x7_X_m 7097 140
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g92_x7_X_m 27092 26751
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g102_x7_X_m 26393 26213
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g165_x7_X_m 26708 26608
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g153_x7_X_m 26170 24745
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g36_x7_X_m 864 852
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g86_x7_X_p 24861 28507
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g2n11_x7_X_m 16814 15870
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g40n11_x7_X_m 6170 5980
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g18n11e20k56_x7_X_m 7097 921
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g153_x7_X_m 26696 26596
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g149_x7_X_m 27676 27204
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g97_x7_X_m 27008 26820
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g145_x7_X_m 26170 24892
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g136_x7_X_m 27197 27054
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g181_x7_X_m 2504 2286
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g94_x7_X_m 6960 6695
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g81_x7_X_m 26708 26611
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g115_x7_X_m 26170 24928
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g139_x7_X_m 26975 26838
        RNASEQ_embryo_him-8_20dC_post-L1_g49_x7_X_m 581 263
        RNASEQ_embryo_him-8_20dC_post-L1_g30n11_x7_X_p 28899 29729
        RNASEQ_embryo_him-8_20dC_post-L1_g58_x7_X_p 25326 26559
        RNASEQ_embryo_him-8_20dC_post-L1_g60_x7_X_m 27092 26325
        RNASEQ_embryo_him-8_20dC_post-L1_g34n11_x7_X_m 7097 6608
        RNASEQ_embryo_him-8_20dC_post-L1_g75_x7_X_m 6322 5699
        RNASEQ_embryo_him-8_20dC_post-L1_g62_x7_X_m 26170 24745
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g28n11_x7_X_m 7097 140
        RNASEQ_L4_soma_JK1107_no_DNaseI_g68_x7_X_m 4144 1020
        RNASEQ_L4_soma_JK1107_no_DNaseI_g89_x7_X_p 26422 28516
        RNASEQ_L4_soma_JK1107_no_DNaseI_g97_x7_X_p 10836 11036
        RNASEQ_L4_soma_JK1107_no_DNaseI_g81_x7_X_p 24861 25024
        RNASEQ_L4_soma_JK1107_no_DNaseI_g49n11_x7_X_p 30215 31851
        RNASEQ_L4_soma_JK1107_no_DNaseI_g74n11_x7_X_m 7097 6454
        RNASEQ_L4_soma_JK1107_no_DNaseI_g135_x7_X_m 6322 5609
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g38_x7_X_m 581 140
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g40n11_x7_X_p 30545 31851
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g57_x7_X_p 24861 28516
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g18n11_x7_X_p 28899 29729
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g108_x7_X_m 27092 26958
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g42_x7_X_m 7097 552
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g91_x7_X_m 26170 24820
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g175_x7_X_m 26541 26467
        RNASEQ_early_embryo_g38n11s19k52_x7_X_m 581 552
        RNASEQ_early_embryo_g35n11_x7_X_p 28899 31851
        RNASEQ_early_embryo_g38n11_x7_X_m 7097 140
        RNASEQ_early_embryo_g62_x7_X_m 27724 24745
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g31n11e20k117_x7t1_X_m 1021 858
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g43n11s3k67_x7_X_p 31042 31263
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g55_x7_X_m 27724 24745
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g31n11_x7t1_X_m 7097 140
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g24n11_x7t1_X_m 1021 140
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g80n11_x7_X_p 26391 28516
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g33n11_x7_X_p 24318 26610
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g86n11_x7_X_m 27197 24745
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g23n11m19_x7t1_X_m 7097 1470
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g19n11_x7_X_m 1021 552
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g26n11_x7_X_p 28899 29729
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g51n11e15k103_x7_X_m 6170 5980
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g109_x7_X_m 27092 27042
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g18n11e20k103_x7_X_m 7097 873
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g94_x7_X_m 27724 27189
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g15n11s19k62_x7_X_m 581 140
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g8n11_x7t1_X_m 16814 15870
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g129_x7_X_m 27676 27210
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g16n11_x7_X_m 7097 552
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g52n11_x7t1_X_m 625 552
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g19n11_x7_X_p 28899 29729
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g17n11_x7_X_m 7097 1020
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g69_x7_X_m 1021 977
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g19n11_x7_X_p 28899 29729
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g71_x7_X_p 31555 31851
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g56n11_x7_X_p 30215 31104
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g68_x7_X_m 6170 140
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g38n11_x7_X_m 7097 6904
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g79_x7_X_m 6658 6281
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g145_x7_X_m 3120 999
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g48n11_x7_X_p 24318 28516
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g175_x7_X_m 27703 27198
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g83_x7_X_m 6468 6099
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g61_x7_X_m 581 552
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g97n11_x7_X_p 10836 11147
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g10n11_x7_X_m 16814 15870
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g21n11_x7_X_p 28899 29729
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g50n11_x7_X_p 24318 28516
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g40n11_x7_X_m 7097 140
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g70_x7_X_m 581 552
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g223_x7_X_m 26520 26467
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g138_x7_X_m 26938 26825
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g50n11_x7_X_m 7097 5210
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g44_x7_X_m 6658 140
        C15C7.gc7 5700 70
        F56E3.gc1 7097 137
        F56E3.gc2 27724 17130
        ContigX.elegans.jigsaw.495.mRNA495 28030 25686
        AG1201_F56E3.3.T1 7097 137
        AG1201_F56E3.3.T2 7097 137
        AG1201_F56E3.3.T3 7097 137
        AG1201_F56E3.3.T4 7097 137
        AG1201_F56E3.3.T5 7097 137
        AG1201_F56E3.4.T3 24945 24742
        AG1201_F56E3.4.T6 25113 24742
        AG1201_F56E3.4.T1 27724 24742
        AG1201_F56E3.4.T2 27724 24742
        AG1201_F56E3.4.T7 27724 24742
        AG1201_RIT6M.1630.T1 31350 31222
        AG1201_RIT6M.1630.T2 31951 31225
      Transcript (18)
      PCR_product (12)
      Allele (451)
      Oligo_set (2)
      Feature_object (120)
      Feature_data: F56E3:Polysome 1 32816
        F56E3:TranscriptionallyActiveRegion 1 32816
        F56E3:ChIPSeqTF 1 32816
        F56E3:TRF 1 32816
        F56E3:Dust 1 32816
        F56E3:inverted 1 32816
      Homol_data (20)
  Structure: From: Source: CHROMOSOME_X
    Overlap_right: F28B4 32617
    Overlap_left: C15C7
    Clone_left_end: F28B4 32617
      F56E3 5452
    Clone_right_end: C15C7 5700
  DB_info: Database: EMBL NDB_AC FO080551
        NDB_ID _U41536
        NDB_SV FO080551.1
    Secondary_accession: U41536
    DB_remark: The 5' clone is C15C7, 5700 bp overlap; the 3' clone is F28B4, 200 bp overlap. Actual start of this clone is at base position 5452 of F56E3; actual end is at 9953 of F28B4.
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin (5)
  Visible: Clone: F56E3
    Reference: WBPaper00022810
  Properties: Genomic_canonical
    Checksum: MD5: 521dabb8514dffa37abab4ce8da32ed6
    Status: Finished
      Submitted: 17 Nov 1995 00:00:00
  Map: Sequence-X
  Interpolated_map_position: X -11.0523
  Method: Genomic_canonical