WormBase Tree Display for Sequence: F15D4

F15D4 DNA: F15D4 42776
  SMap: S_child: Gene_child: WBGene00008861 30263 26409
        WBGene00168059 34456 34436
        WBGene00001459 22448 24559
        WBGene00008863 36328 37205
        WBGene00008860 25049 24546
        WBGene00165653 33935 33915
        WBGene00008862 32518 34916
        WBGene00008859 3234 3906
      CDS_child: F15D4.2 3238 3844
        F15D4.3 25048 24669
        F15D4.3:wp130 25048 23595
        F15D4.4 30237 26437
        F15D4.4:wp61 30237 26262
        F15D4.4:wp109 30237 26361
        F15D4.5 32572 34786
        F15D4.5:wp114 32980 34786
        F15D4.6 36350 36650
        F15D4.6:wp114 36337 37024
        F15D4.8 22477 24221
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g26n11_x27_II_p 22477 24218
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g96_x27_II_p 36708 37021
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g115_x27_II_m 29238 28461
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g5n11_x27_II_m 25049 24586
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g4n11_x27_II_p 3238 3841
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g53n11_x27_II_p 43 2572
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g74_x27_II_p 32572 34783
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g89_x27_II_p 33541 33892
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g12n11_x27_II_p 22477 24218
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g93_x27_II_p 34235 34459
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g84_x27_II_m 26711 26526
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g5n11_x27_II_p 3238 3841
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g88_x27_II_m 29238 28527
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g8n11_x27_II_m 25049 24586
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g104_x27_II_m 27182 27068
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g5n11_x27_II_m 25049 24586
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g115_x27_II_m 26711 26655
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g15n11_x27_II_p 3238 3829
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g110_x27_II_p 32514 32579
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g99_x27_II_p 33541 33753
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g65_x27_II_p 279 2572
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g20n11_x27_II_p 22477 24218
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g11n11_x27_II_p 3238 3841
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g2n11_x27_II_m 25049 24586
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g101_x27_II_p 882 2326
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g119_x27_II_p 52 132
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g9n11_x27_II_p 22477 24218
        RNASEQ_embryo_him-8_20dC_post-L1_g85n11_x27_II_p 22477 24218
        RNASEQ_embryo_him-8_20dC_post-L1_g8n11_x27_II_m 25049 24586
        RNASEQ_embryo_him-8_20dC_post-L1_g83_x27_II_p 33091 33141
        RNASEQ_embryo_him-8_20dC_post-L1_g6n11_x27_II_p 3238 3841
        RNASEQ_embryo_him-8_20dC_post-L1_g55n11_x27_II_p 43 2572
        RNASEQ_embryo_him-8_20dC_post-L1_g71_x27_II_p 34175 34783
        RNASEQ_embryo_him-8_20dC_post-L1_g95_x27_II_p 33273 34006
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g141_x27_II_m 26833 26756
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g142_x27_II_p 36584 36823
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g133_x27_II_p 34175 34318
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g136_x27_II_p 36350 36560
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g19n11_x27_II_p 3238 3838
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g107_x27_II_p 34544 34783
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g16n11_x27_II_p 22477 24218
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g120_x27_II_p 32498 32581
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g6n11_x27_II_m 25049 24586
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g137_x27_II_m 27197 27117
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g131_x27_II_p 33775 33922
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g73_x27_II_p 876 2521
        RNASEQ_L4_soma_JK1107_no_DNaseI_g103_x27_II_p 876 2302
        RNASEQ_L4_soma_JK1107_no_DNaseI_g82_x27_II_p 34175 34783
        RNASEQ_L4_soma_JK1107_no_DNaseI_g148_x27_II_p 2324 2518
        RNASEQ_L4_soma_JK1107_no_DNaseI_g86_x27_II_p 49 194
        RNASEQ_L4_soma_JK1107_no_DNaseI_g18n11_x27_II_p 3238 3841
        RNASEQ_L4_soma_JK1107_no_DNaseI_g6n11_x27_II_m 25049 24586
        RNASEQ_L4_soma_JK1107_no_DNaseI_g15n11_x27_II_p 22477 24218
        RNASEQ_L4_soma_JK1107_no_DNaseI_g112_x27_II_p 32501 32959
        RNASEQ_L4_soma_JK1107_no_DNaseI_g124_x27_II_p 33273 33774
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g85_x27_II_p 32514 32960
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g10n11_x27_II_p 3238 3841
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g109_x27_II_p 33541 33886
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g7n11_x27_II_p 22477 24218
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g83_x27_II_p 34175 34486
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g108_x27_II_m 26711 26496
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g104_x27_II_p 34597 34899
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g4n11_x27_II_m 25049 24586
        RNASEQ_early_embryo_g83_x27_II_p 33273 34783
        RNASEQ_early_embryo_g84_x27_II_p 32513 32581
        RNASEQ_early_embryo_g22n11_x27_II_p 3238 3841
        RNASEQ_early_embryo_g110_x27_II_p 36847 37010
        RNASEQ_early_embryo_g58n11_x27_II_p 43 134
        RNASEQ_early_embryo_g10n11_x27_II_m 25049 24586
        RNASEQ_early_embryo_g106_x27_II_p 24160 24408
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g97_x27_II_p 36458 36572
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g23n11_x27_II_p 3238 3841
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g8n11_x27_II_m 25049 24586
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g52_x27_II_p 33273 34783
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g80_x27_II_p 36708 37021
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g60n11_x27_II_p 43 2572
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g66_x27_II_p 32980 33209
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g79n11_x27_II_p 22477 24218
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g77_x27_II_p 32504 32578
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g4n11_x27_II_p 22477 24218
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g99_x27_II_p 2159 2284
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g70_x27_II_m 30237 26440
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g79_x27_II_p 33210 34675
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g39n11_x27_II_p 3238 3841
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g9n11_x27_II_m 25049 24586
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g36_x27_II_p 3325 3841
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g8n11_x27_II_p 22477 24218
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g110_x27_II_m 28397 28311
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g103_x27_II_p 34544 34636
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g5n11_x27_II_m 25049 24586
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g89_x27_II_p 33041 33115
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g82_x27_II_p 33541 34783
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g13n11_x27_II_p 22477 24218
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g4n11_x27_II_m 25049 24586
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g100_x27_II_m 26806 26662
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g52n11_x27_II_p 3238 3841
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g103_x27_II_m 27865 27141
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g97_x27_II_p 36750 36845
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g83_x27_II_p 32517 32945
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g83_x27_II_p 33273 34045
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g47n11_x27_II_p 3238 3811
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g77_x27_II_p 32572 33212
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g28n11_x27_II_p 22477 24218
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g115_x27_II_p 2159 2572
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g103_x27_II_p 34175 34783
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g6n11_x27_II_m 25049 24586
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g3n11_x27_II_m 25049 24586
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g154_x27_II_m 29415 29308
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g114_x27_II_m 29223 28542
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g59_x27_II_p 33273 34783
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g165_x27_II_m 27909 27829
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g39n11_x27_II_p 43 2572
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g164_x27_II_p 36575 36805
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g77_x27_II_p 32980 33215
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g115_x27_II_p 36350 36563
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g5n11_x27_II_p 3238 3841
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g45n11_x27_II_p 22477 24218
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g85_x27_II_p 32495 32962
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g133_x27_II_m 28188 27909
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g77n11_x27_II_p 22477 24218
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g9n11_x27_II_m 25049 24586
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g60n11_x27_II_p 2159 2430
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g8n11_x27_II_p 3238 3841
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g63_x27_II_p 32572 34783
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g110_x27_II_m 26808 26640
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g102_x27_II_p 36813 36994
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g34n11_x27_II_p 43 2572
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g105_x27_II_p 36350 36647
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g10n11_x27_II_p 22477 24218
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g7n11_x27_II_p 3238 3841
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g114_x27_II_p 36452 36581
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g5n11_x27_II_m 25049 24586
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g118_x27_II_p 36750 36997
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g37_x27_II_p 32572 34783
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g72_x27_II_p 279 2572
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g47n11_x27_II_p 43 134
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g6n11_x27_II_m 25049 24586
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g3n11_x27_II_p 3238 3841
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g41_x27_II_p 33273 34783
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g5n11_x27_II_p 3238 3378
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g59_x27_II_p 32450 33115
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g124_x27_II_p 36350 36647
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g117_x27_II_m 29223 28341
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g27n11_x27_II_p 22477 24218
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g40n11_x27_II_p 43 2572
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g111_x27_II_m 29415 29233
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g114_x27_II_p 36810 36958
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g102_x27_II_m 26808 26400
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g54_x27_II_p 3325 3841
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g101_x27_II_p 36759 36952
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g86_x27_II_p 33273 34669
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g109_x27_II_p 24160 24408
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g43n11_x27_II_p 43 2572
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g5n11_x27_II_m 25049 24586
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g75_x27_II_p 32572 33254
        F15D4.gc1 43 2575
        F15D4.gc2 3238 3844
        F15D4.gc3 25048 24669
        F15D4.gc4 30237 26262
        F15D4.gc5 32980 34786
        F15D4.gc6 36337 37071
        F15D4.gc7 39203 42725
        ContigII.elegans.jigsaw.3241.mRNA3241 30243 25208
        ContigII.elegans.jigsaw.3240.mRNA3240 25284 24554
        ContigII.elegans.jigsaw.3239.mRNA3239 22425 24494
        ContigII.elegans.jigsaw.3238.mRNA3238 3185 3909
        ContigII.elegans.jigsaw.3242.mRNA3242 32195 35029
        ContigII.elegans.jigsaw.3243.mRNA3243 35505 36608
        AG1201_F15D4.1.T1 43 2575
        AG1201_F15D4.1.T2 43 2575
        AG1201_F15D4.2.T1 3238 3844
        AG1201_F15D4.2.T2 3238 3844
        AG1201_F15D4.8.T1 22477 24221
        AG1201_F15D4.3.T4 25040 24583
        AG1201_F15D4.3.T1 25049 24583
        AG1201_F15D4.3.T5 25055 24583
        AG1201_RIT2P.2096.T1 24697 24867
        AG1201_F15D4.4.T2 29415 26437
        AG1201_F15D4.4.T1 30237 26437
        AG1201_F15D4.5.T4 32572 34786
        AG1201_F15D4.5.T3 32980 34786
        AG1201_F15D4.5.T1 33541 34786
        AG1201_F15D4.5.T2 33541 34786
        AG1201_F15D4.6.T1 36350 36650
      Transcript: F15D4.9 33935 33915
        F15D4.10 34456 34436
        F15D4.2.1 3234 3906
        F15D4.3.1 25049 24546
        F15D4.4.1 30263 26409
        F15D4.5.1 32518 34916
        F15D4.6.1 36328 37205
        F15D4.8.1 22448 24559
      PCR_product (21)
      Allele (1444)
      Oligo_set: Aff_F15D4.2 3238 3844
        Aff_F15D4.3 25029 23595
        Aff_F15D4.4 26992 26262
        Aff_F15D4.5 34088 34786
        Aff_F15D4.6 36337 37024
        Aff_F15D4.7 42177 42776
      Feature_object (194)
      Feature_data: F15D4:Polysome 1 42776
        F15D4:TranscriptionallyActiveRegion 1 42776
        F15D4:ChIPSeqTF 1 42776
        F15D4:TRF 1 42776
        F15D4:Dust 1 42776
        F15D4:inverted 1 42776
      Homol_data (20)
  Structure: From: Source: CHROMOSOME_II
    Overlap_right: Y48C3A 42677
    Overlap_left: W09E7
    Clone_left_end: F15D4 1
    Clone_right_end: W09E7 21745
      F15D4 42776
  DB_info: Database: EMBL NDB_AC Z80344
        NDB_SV Z80344.2
    DB_remark: [121025] Sequence correction: SNP 0 bases @ 26765
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Smye R
    From_laboratory: HX
    Date_directory: 960822
    Species: Caenorhabditis elegans
    Strain: WBStrain00000001
  Visible: Clone: F15D4
  Properties: Genomic_canonical
    Checksum: MD5: d849506599cb5a415b5f65949e7ad1fc
    Status: Finished: 22 Aug 1996 00:00:00
      Submitted: 23 Sep 1996 00:00:00
      Annotated: 08 Oct 1996 00:00:00
  Map: Sequence-II Ends (2)
  Interpolated_map_position: II 16.0793
  Assembly_tags: Finished Left 1 1
    Finished Right 42776 42776
    Clone left end 4 1 F15D4
    Clone right end 21742 21745 W09E7
      42773 42776 F15D4
  Method: Genomic_canonical