WormBase Tree Display for Sequence: F12B6

F12B6 DNA: F12B6 29268
  SMap: S_child: Gene_child (3)
      CDS_child: F12B6.1:wp156 28358 16627
        F12B6.2a 10635 15274
        F12B6.2b:wp242 10820 15114
        F12B6.2c 10635 15274
        F12B6.2d:wp242 10635 14397
        F12B6.2f 14953 15274
        F12B6.3:wp147 2705 7756
        F12B6.3:wp242 2705 7756
        F12B6.3a 2705 7698
        F12B6.3b 2705 7698
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g95_x5_I_m 23130 16759
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g99_x5_I_m 27890 26539
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g76n11_x5_I_p 10620 14394
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g108_x5_I_m 26529 24727
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g90n11_x5_I_p 10820 15271
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g90n11s8k56_x5_I_p 14953 15057
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g58_x5_I_m 23130 16630
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g103_x5_I_p 13152 13479
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g102n11_x5_I_p 10620 10839
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g121_x5_I_p 24333 24497
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g59_x5_I_m 27519 25002
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g117_x5_I_p 10820 11210
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g84_x5_I_m 27750 27580
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g101_x5_I_p 13571 14218
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g52_x5_I_m 23130 16660
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g85e4k62_x5_I_p 14172 14708
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g90_x5_I_p 14261 14615
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g71_x5_I_m 12913 11902
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g35n11_x5_I_p 19869 26385
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g9n11_x5_I_p 12254 13196
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g67_x5_I_p 22938 22976
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g62_x5_I_m 3945 2640
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g88_x5_I_p 9770 9833
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g120_x5_I_m 19045 18244
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g70_x5_I_p 13152 13407
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g68_x5_I_p 12063 12938
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g50_x5_I_p 13468 15229
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g102_x5_I_m 18147 18031
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g35n11_x5_I_p 10620 11216
        RNASEQ_embryo_him-8_20dC_post-L1_g98_x5_I_m 19598 19453
        RNASEQ_embryo_him-8_20dC_post-L1_g115_x5_I_p 13592 14203
        RNASEQ_embryo_him-8_20dC_post-L1_g143_x5_I_m 23130 22957
        RNASEQ_embryo_him-8_20dC_post-L1_g106_x5_I_m 19279 18094
        RNASEQ_embryo_him-8_20dC_post-L1_g118_x5_I_m 20845 19915
        RNASEQ_embryo_him-8_20dC_post-L1_g102_x5_I_m 18094 17951
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g57_x5_I_m 23130 16630
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g39n11s10k76_x5_I_p 14953 15057
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g28n11_x5_I_p 10620 14394
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g39n11_x5_I_p 10820 15271
        RNASEQ_L4_soma_JK1107_no_DNaseI_g40n11_x5_I_p 10620 11255
        RNASEQ_L4_soma_JK1107_no_DNaseI_g98_x5_I_m 22874 22177
        RNASEQ_L4_soma_JK1107_no_DNaseI_g121_x5_I_m 19003 18205
        RNASEQ_L4_soma_JK1107_no_DNaseI_g114_x5_I_m 26367 26161
        RNASEQ_L4_soma_JK1107_no_DNaseI_g110_x5_I_p 15040 15217
        RNASEQ_L4_soma_JK1107_no_DNaseI_g86_x5_I_p 14953 15036
        RNASEQ_L4_soma_JK1107_no_DNaseI_g145_x5_I_m 22005 21934
        RNASEQ_L4_soma_JK1107_no_DNaseI_g82_x5_I_p 13152 13431
        RNASEQ_L4_soma_JK1107_no_DNaseI_g107_x5_I_m 28137 27838
        RNASEQ_L4_soma_JK1107_no_DNaseI_g65_x5_I_p 13468 14284
        RNASEQ_L4_soma_JK1107_no_DNaseI_g109_x5_I_p 11265 12050
        RNASEQ_L4_soma_JK1107_no_DNaseI_g147_x5_I_p 12077 13030
        RNASEQ_L4_soma_JK1107_no_DNaseI_g108_x5_I_m 18114 17980
        RNASEQ_L4_soma_JK1107_no_DNaseI_g45_x5_I_m 12913 11409
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g72n11_x5_I_p 10620 10825
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g79_x5_I_p 13571 14618
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g57_x5_I_m 23130 16630
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g99_x5_I_p 11306 12841
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g73_x5_I_p 14953 15271
        RNASEQ_early_embryo_g97_x5_I_p 11217 11942
        RNASEQ_early_embryo_g76n11_x5_I_m 28358 26095
        RNASEQ_early_embryo_g100_x5_I_p 14261 14511
        RNASEQ_early_embryo_g96_x5_I_p 14953 15232
        RNASEQ_early_embryo_g94_x5_I_p 13468 13660
        RNASEQ_early_embryo_g93_x5_I_m 25963 24709
        RNASEQ_early_embryo_g77_x5_I_m 23130 16630
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g82_x5_I_p 11217 15054
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g101_x5_I_p 15170 15232
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g86n11_x5_I_p 10620 10804
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g68_x5_I_m 23130 16630
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g38_x5_I_p 10820 15271
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g64_x5_I_m 23130 16630
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g94_x5_I_m 24921 24712
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g81_x5_I_m 23130 21711
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g109_x5_I_p 10820 15271
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g73_x5_I_m 21078 16630
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g93_x5_I_m 26127 25187
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g53_x5_I_m 23130 16630
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g62_x5_I_p 10820 15271
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g88_x5_I_p 13152 13654
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g101_x5_I_m 19045 18118
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g107_x5_I_m 19377 19226
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g91_x5_I_m 27890 27583
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g98_x5_I_m 21078 19884
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g117_x5_I_m 21716 21082
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g102_x5_I_m 19785 19663
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g128_x5_I_m 22838 22216
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g86_x5_I_p 10820 12074
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g99_x5_I_m 19598 19435
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g92_x5_I_m 17697 16636
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g115_x5_I_m 24921 24850
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g96_x5_I_p 14953 15036
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g109n11_x5_I_p 10820 12872
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g102_x5_I_m 23130 19875
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g115_x5_I_p 11279 12871
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g122_x5_I_m 17892 16633
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g54n11_x5_I_p 10620 11273
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g100_x5_I_m 19754 19217
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g107_x5_I_m 19204 17905
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g119_x5_I_m 26418 25988
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g92_x5_I_p 12882 15271
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g92e6k144_x5_I_p 14562 14729
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g165_x5_I_m 27519 27409
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g103_x5_I_m 24921 24712
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g95e6k218_x5_I_p 14562 14729
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g108n11_x5_I_p 10820 11255
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g134_x5_I_m 17697 16774
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g140_x5_I_m 20967 19965
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g95s3k52_x5_I_p 14261 14323
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g114_x5_I_m 27519 26140
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g81n11_x5_I_p 10620 10863
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g107_x5_I_m 26127 24712
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g100_x5_I_p 11259 11951
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g98_x5_I_m 19874 17842
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g101_x5_I_m 23130 21010
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g95_x5_I_p 12882 15271
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g23n11s10k62_x5_I_p 14953 15057
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g23n11e10k170_x5_I_p 14562 14729
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g82_x5_I_m 23130 17896
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g23n11s7k101_x5_I_p 14261 14323
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g104_x5_I_m 25282 25002
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g23n11_x5_I_p 10620 15271
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g91_x5_I_m 17805 16630
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g65n11_x5_I_p 10820 10863
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g99_x5_I_m 26124 25997
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g95_x5_I_m 26364 26140
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g98_x5_I_m 27519 24724
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g85n11s7k112_x5_I_p 14647 15057
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g97_x5_I_m 17805 16630
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g90_x5_I_m 23130 17902
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g85n21_x5_I_p 14953 15057
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g33n11s7k112_x5_I_p 14261 14323
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g82n11_x5_I_p 10820 10863
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g33n11m10_x5_I_p 14562 14729
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g33n11_x5_I_p 10620 15271
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g95_x5_I_m 22890 19752
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g97_x5_I_m 27890 26419
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g120n11_x5_I_p 10820 15271
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g120n11s8k52_x5_I_p 14953 15057
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g117_x5_I_m 25264 25011
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g38n11_x5_I_p 10620 10863
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g131_x5_I_m 23091 22903
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g98_x5_I_m 26127 25271
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g84_x5_I_m 19739 18094
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g89_x5_I_m 17766 16630
        F12B6.gc1 1546 433
        F12B6.gc2 3701 7698
        F12B6.gc3 10620 15274
        F12B6.gc4 28372 15419
        ContigI.elegans.jigsaw.278.mRNA278 10606 15376
        ContigI.elegans.jigsaw.277.mRNA277 2581 7771
        AG1201_F12B6.3.T1 2705 7049
        AG1201_F12B6.3.T3 2705 7049
        AG1201_F12B6.3.T2 2776 7049
        AG1201_F12B6.3.T4 7643 7756
        AG1201_F12B6.2.T6 10620 15274
        AG1201_F12B6.2.T4 10820 14397
        AG1201_F12B6.2.T3 10820 15274
        AG1201_F12B6.2.T5 10820 15274
        AG1201_F12B6.2.T1 14953 15274
        AG1201_F12B6.1.T7 19964 16627
        AG1201_F12B6.1.T6 23130 16627
        AG1201_F12B6.1.T3 28449 24706
      Transcript: F12B6.2d 10635 15274
        F12B6.2e 10635 15274
        F12B6.4 3644 3624
        F12B6.2a.1 10606 15383
        F12B6.2c.1 10635 15274
        F12B6.2f.1 14953 15274
        F12B6.3a.1 2705 7698
        F12B6.3b.1 2705 7698
      PCR_product (13)
      Allele (564)
      Oligo_set: Aff_F12B6.1 18168 17521
        Aff_F12B6.2 13426 14732
        Aff_F12B6.3 6085 7756
        Aff_Y39G10B_248.B 6037 7756
        Aff_Y39G10B_248.C 12918 14528
      Feature_object (69)
      Feature_data: F12B6:Polysome 1 29268
        F12B6:TranscriptionallyActiveRegion 1 29268
        F12B6:ChIPSeqTF 1 29268
        F12B6:TRF 1 29268
        F12B6:Dust 1 29268
        F12B6:inverted 1 29268
      Homol_data (17)
  Structure: From: Source: CHROMOSOME_I
    Overlap_right: Y39G10AL 29069
    Overlap_left: W03F11
    Clone_left_end: F12B6 1
    Clone_right_end: W03F11 200
      F12B6 29268
  DB_info: Database: EMBL NDB_AC FO081123
        NDB_ID _AF003138
        NDB_SV FO081123.1
    Secondary_accession: AF003138
    DB_remark: The 5' clone is W03F11, 1897 bp overlap; the 3' clone is Y39G10AL, 200 bp overlap. Actual start of this clone is at base position 1 of F12B6; actual end is at 29268 of F12B6.
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Pauley A
      Maggi L
    From_laboratory: RW
    Date: 16 Nov 1999 00:00:00
      05 Dec 1996 00:00:00
    Date_directory: 961204
    Species: Caenorhabditis elegans
  Visible: Clone: F12B6
  Properties: Genomic_canonical
    Checksum: MD5: 0ed226df9fefebadd2a8906ed5fcdbb9
    Status: Finished
      Submitted: 16 Nov 1999 00:00:00
  Map: Sequence-I
  Interpolated_map_position: I -10.5782
  Method: Genomic_canonical