WormBase Tree Display for Sequence: T04B2

T04B2 DNA: T04B2 20535
  SMap: S_child: Gene_child: WBGene00011421 3994 2692
        WBGene00044983 13583 13554
        WBGene00167154 17132 17112
        WBGene00001487 4743 7301
        WBGene00011422 8970 12134
        WBGene00011424 2465 1320
        WBGene00011425 17800 15552
        WBGene00005723 15212 12848
        WBGene00044018 12750 12108
      CDS_child: T04B2.1:wp139 3994 2692
        T04B2.2a 5825 7160
        T04B2.2b:wp243 5323 7160
        T04B2.3a 8970 12071
        T04B2.3b 10248 12071
        T04B2.4 15212 12848
        T04B2.4:wp93 17574 12476
        T04B2.6 2353 1406
        T04B2.6a:wp243 2353 1216
        T04B2.7 17273 15598
        T04B2.7:wp121 17574 15598
        T04B2.8 12677 12143
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g105_x21_IV_m 1946 1748
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g127_x21_IV_p 10328 10526
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g120n11_x21_IV_p 10171 10310
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g128_x21_IV_m 1690 1409
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g259_x21_IV_p 9737 10264
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g168_x21_IV_m 3394 3263
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g155_x21_IV_m 2974 2695
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g135_x21_IV_p 10698 10981
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g158_x21_IV_m 307 55
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g151_x21_IV_p 9672 10181
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g119_x21_IV_p 10248 10577
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g82_x21_IV_m 2353 1409
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g87_x21_IV_p 5422 7124
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g173_x21_IV_p 11859 12011
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g73_x21_IV_m 2353 1409
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g152_x21_IV_m 198 130
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g61_x21_IV_p 9672 12068
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g146_x21_IV_p 9672 10217
        RNASEQ_embryo_him-8_20dC_post-L1_g154_x21_IV_p 10248 10700
        RNASEQ_embryo_him-8_20dC_post-L1_g106_x21_IV_m 18972 18742
        RNASEQ_embryo_him-8_20dC_post-L1_g133_x21_IV_p 10877 10984
        RNASEQ_embryo_him-8_20dC_post-L1_g68n11_x21_IV_p 10506 10703
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g111n11_x21_IV_m 16273 15601
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g161_x21_IV_p 9672 12068
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g65_x21_IV_p 5422 7157
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g63n11_x21_IV_m 20061 18700
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g180_x21_IV_m 1579 1409
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g58n11_x21_IV_p 10248 10265
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g108_x21_IV_m 12677 12146
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g269_x21_IV_m 640 590
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g186_x21_IV_m 1946 1616
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g113_x21_IV_m 17273 16112
        RNASEQ_L4_soma_JK1107_no_DNaseI_g46n11_x21_IV_p 10248 12017
        RNASEQ_L4_soma_JK1107_no_DNaseI_g208_x21_IV_m 1579 1472
        RNASEQ_L4_soma_JK1107_no_DNaseI_g72n11_x21_IV_p 8970 10265
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g100n11_x21_IV_p 10248 12068
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g133_x21_IV_m 3343 3047
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g148_x21_IV_p 9672 10265
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g156_x21_IV_p 9024 9479
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g86_x21_IV_m 2353 1409
        RNASEQ_early_embryo_g106_x21_IV_p 8970 12068
        RNASEQ_early_embryo_g80n11_x21_IV_p 10248 10265
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g111n11_x21_IV_p 8970 12068
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g76n11_x21_IV_p 10248 10265
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g98_x21_IV_m 2353 1409
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g42n11_x21t1_IV_m 20061 18700
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g148_x21_IV_p 6258 6941
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g122_x21_IV_p 9672 12068
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g145_x21_IV_m 716 621
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g88n11_x21_IV_p 10248 10265
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g55n11_x21_IV_p 10248 10265
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g177_x21_IV_m 1690 1553
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g108_x21_IV_p 9672 12068
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g94n11_x21_IV_p 10248 10265
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g147_x21_IV_p 5903 6377
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g179_x21_IV_m 2260 2061
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g171_x21_IV_m 1579 1451
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g178_x21_IV_p 6609 6695
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g157_x21_IV_m 1946 1625
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g128_x21_IV_p 9672 12044
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g160_x21_IV_m 17270 16877
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g229_x21_IV_m 16138 16035
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g218_x21_IV_m 307 25
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g148_x21_IV_p 5903 7082
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g240_x21_IV_m 15830 15649
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g109_x21_IV_p 9672 12068
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g83_x21_IV_p 5375 5840
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g157_x21_IV_m 12371 12235
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g283_x21_IV_p 9672 10366
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g284_x21_IV_p 5975 6124
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g197_x21_IV_m 1579 1451
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g160_x21_IV_m 2353 1974
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g129_x21_IV_p 10782 11846
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g190_x21_IV_p 9541 9639
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g151_x21_IV_m 1579 1466
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g162_x21_IV_p 6125 6263
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g203_x21_IV_p 10736 10816
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g159_x21_IV_m 2353 2157
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g191_x21_IV_m 1579 1409
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g172_x21_IV_m 1946 1709
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g186_x21_IV_p 9723 10265
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g128_x21_IV_p 10617 10945
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g122n11_x21_IV_p 10248 10514
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g238_x21_IV_p 6125 6251
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g202_x21_IV_p 9723 10265
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g132n11_x21_IV_p 10248 10408
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g214_x21_IV_p 6804 6884
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g153_x21_IV_p 10421 10544
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g242_x21_IV_m 1507 1276
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g123_x21_IV_p 5422 7157
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g160_x21_IV_p 9510 9569
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g170_x21_IV_p 9039 9086
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g115n11_x21_IV_p 10248 12068
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g183_x21_IV_m 12659 12527
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g241_x21_IV_m 1690 1553
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g140_x21_IV_m 16273 15631
        T04B2.gc1 603 67
        T04B2.gc2 2353 1406
        T04B2.gc3 3994 2692
        T04B2.gc4 5825 7160
        T04B2.gc5 8970 12071
        T04B2.gc6 12677 12143
        T04B2.gc7 15212 13291
        T04B2.gc8 17273 15598
        T04B2.gc9 20061 18697
        ContigIV.elegans.jigsaw.1984.mRNA1984 17273 15511
        ContigIV.elegans.jigsaw.1983.mRNA1983 15212 12843
        ContigIV.elegans.jigsaw.1981.mRNA1981 8921 12125
        ContigIV.elegans.jigsaw.1982.mRNA1982 12940 12111
        ContigIV.elegans.jigsaw.1980.mRNA1980 5761 7263
        ContigIV.elegans.jigsaw.1979.mRNA1979 4171 2602
        ContigIV.elegans.jigsaw.1978.mRNA1978 2400 1318
        AG1201_T04B2.6.T6 2353 1273
        AG1201_T04B2.6.T1 2353 1406
        AG1201_T04B2.1.T1p 2974 2834
        AG1201_T04B2.2.T1 5323 7160
        AG1201_T04B2.2.T2 5825 7160
        AG1201_T04B2.3.T2 8970 12071
        AG1201_T04B2.3.T1 10248 12071
        AG1201_T04B2.8.T1 12677 12143
        AG1201_T04B2.4.T2 14084 12848
        AG1201_T04B2.4.T3 15212 12848
        AG1201_T04B2.4.T4 15212 12848
        AG1201_T04B2.4.T1 15212 14132
        AG1201_T04B2.7.T1 17273 15598
      Transcript (12)
      Pseudogene: T04B2.1 3994 2692
        T04B2.10:wp217 4204 4385
      PCR_product (28)
      Allele (239)
      Oligo_set: Aff_T04B2.1 3334 2692
        Aff_T04B2.2 6477 7160
        Aff_T04B2.3 10388 11906
        Aff_T04B2.4 14179 12476
        Aff_T04B2.5 19341 18697
        Aff_T04B2.6 2117 1216
      Feature_object: WBsf997541 9943 10093
        WBsf997542 11263 11413
        WBsf1018038 63 213
        WBsf1018039 9963 10113
        WBsf022938 10170 10171
        WBsf023055 4743 4744
        WBsf086117 12134 12134
        WBsf086118 18194 18194
        WBsf086962 2612 2612
        WBsf086963 18250 18250
        WBsf088863 10704 10704
        WBsf088864 19696 19696
        WBsf089627 7260 7260
        WBsf089628 18150 18150
        WBsf090412 5843 5843
        WBsf090413 18179 18179
        WBsf091448 12131 12131
        WBsf091678 12136 12136
        WBsf092327 18309 18309
        WBsf128588 8959 8960
        WBsf176116 2612 2612
        WBsf176117 18250 18250
        WBsf176421 18194 18194
        WBsf177816 18309 18309
        WBsf178466 10370 10370
        WBsf179486 12019 12019
        WBsf179487 18184 18184
        WBsf180505 18150 18150
        WBsf180929 18179 18179
        WBsf181573 18232 18232
        WBsf182769 18609 18609
        WBsf183678 19696 19696
        WBsf187890 18194 18193
        WBsf228922 7161 7264
        WBsf228923 12072 12115
        WBsf230655 12142 12117
        WBsf230656 15597 15554
        WBsf230657 18696 18154
        WBsf230658 18696 18196
        WBsf230659 18696 18240
        WBsf230660 18696 18540
        WBsf230661 18696 18584
        WBsf249988 12131 12132
        WBsf249989 18161 18160
        WBsf249990 18236 18235
        WBsf249991 18540 18539
        WBsf251506 1319 1318
        WBsf251924 7265 7266
        WBsf252046 15553 15552
        WBsf252155 12116 12115
        WBsf275247 18195 18194
        WBsf621331 12116 12117
        WBsf621346 12095 12096
        WBsf622101 9868 9869
        WBsf624112 18571 18570
        WBsf624224 18182 18181
        WBsf624352 1333 1332
        WBsf624676 18110 18109
        WBsf624846 18554 18553
        WBsf624899 18502 18501
        WBsf624956 1366 1365
        WBsf625198 18668 18667
        WBsf625349 18529 18528
        WBsf625356 18097 18096
        WBsf625832 20085 20084
        WBsf625889 18515 18514
        WBsf626032 1273 1272
        WBsf626596 18583 18582
        WBsf627709 18621 18620
        WBsf960336 2644 2645
        WBsf960337 3503 3504
        WBsf960338 4174 4173
        WBsf960339 4280 4279
        WBsf960340 8959 8960
        WBsf960341 13719 13720
        WBsf960342 17281 17280
        WBsf960343 17730 17729
        WBsf960344 17730 17729
        WBsf980402 18153 18152
        WBsf445738 18010 18124
        WBsf446297 17814 18029
        WBsf447902 19946 20118
        WBsf449237 2252 2661
        WBsf449787 9842 10165
        WBsf450330 7542 7630
        WBsf452889 10192 10207
        WBsf456484 2337 2693
        WBsf457610 7488 7764
        WBsf458105 2322 2634
        WBsf469726 7436 7823
        WBsf470715 17801 18550
        WBsf471023 12483 12610
        WBsf476934 18327 18503
        WBsf480397 9881 10125
        WBsf485629 9808 10232
        WBsf488745 18292 18503
        WBsf498983 17927 18421
        WBsf646277 10026 10096
        WBsf646278 10122 10153
        WBsf646279 10191 10197
        WBsf683562 4848 4878
        WBsf683563 7585 7596
        WBsf683564 7633 7701
        WBsf683565 7794 7795
        WBsf705462 4807 4763
        WBsf705463 7525 7458
        WBsf705464 7596 7556
        WBsf705465 9955 9890
        WBsf718169 7436 7823
        WBsf267343 16658 16807
        WBsf267344 16913 17044
      Feature_data: T04B2:Polysome 1 20535
        T04B2:TranscriptionallyActiveRegion 1 20535
        T04B2:ChIPSeqTF 1 20535
        T04B2:TRF 1 20535
        T04B2:Dust 1 20535
        T04B2:inverted 1 20535
      Homol_data (20)
  Structure: From: Source: CHROMOSOME_IV
    Overlap_right: W01B6 20432
    Overlap_left: F44D12
    Clone_left_end: T04B2 1
      W01B6 20432
    Clone_right_end: F44D12 6268
  DB_info: Database: EMBL NDB_AC Z68299
        NDB_SV Z68299.1
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Coles L
    From_laboratory: HX
    Date_directory: 951128
    Species: Caenorhabditis elegans
    Strain: WBStrain00000001
  Visible: Clone: T04B2
  Properties: Genomic_canonical
    Checksum: MD5: 913150928591323f09c85b0703d7db64
    Status: Finished: 28 Nov 1995 00:00:00
      Submitted: 20 Dec 1995 00:00:00
      Annotated: 19 Dec 1995 00:00:00
  Map: Sequence-IV Ends: Left: 5066
        Right: 5086
  Interpolated_map_position: IV 4.47345
  Assembly_tags: Clone left end 1 4 Left end of T04B2
      20432 20435 Left end of W01B6
    Finished Left 1 4
    Clone right end 6265 6268 Right end of F44D12
    Finished Right 20532 20535
  Method: Genomic_canonical