WormBase Tree Display for Sequence: Cjap.Contig18181

Cjap.Contig18181 DNA: Cjap.Contig18181 451989
  SMap: S_child: Gene_child (89)
      CDS_child: CJA00159 118709 124268
        CJA01501 68830 69638
        CJA01776 434625 436389
        CJA03796 53270 53025
        CJA03840 282677 279106
        CJA04626 43764 40342
        CJA05187a 408666 417481
        CJA05187b 408666 417481
        CJA05187c 408666 417481
        CJA05192a 290756 291462
        CJA05192b 290828 291462
        CJA06276 308366 313940
        CJA07355 338487 336738
        CJA07795 266912 260558
        CJA07916 363497 364733
        CJA08157 81643 73602
        CJA08426a 61431 64489
        CJA08426b 61431 64489
        CJA08469 190114 190653
        CJA09093 7473 7814
        CJA09285 98 4911
        CJA09286 384166 385942
        CJA10907 239340 241777
        CJA10908 257210 257802
        CJA11203 272201 278815
        CJA11366 446925 446558
        CJA11672 72502 70438
        CJA11681 224396 224980
        CJA11999a 213630 215741
        CJA11999a:jp232 213630 215741
        CJA11999b 213630 215741
        CJA12292a 323837 327525
        CJA12292b 323837 332099
        CJA12292c 329175 332099
        CJA12622 112601 113988
        CJA13235 114604 115206
        CJA13422 162589 163629
        CJA13853 65696 65025
        CJA13967 212674 212026
        CJA14146 5240 6967
        CJA14262 388284 386559
        CJA14687a 144334 135158
        CJA14687b 144334 135150
        CJA14935 314345 315584
        CJA15673a 254290 256327
        CJA15673b 250813 256327
        CJA15673c 250813 253997
        CJA15690 372049 366672
        CJA15803 115693 116297
        CJA16017 179927 182607
        CJA16206 399307 391210
        CJA16775 377652 375966
        CJA16973a 203578 208502
        CJA16973b 203578 208502
        CJA16973c 203578 208502
        CJA17353 127002 128044
        CJA17499 303017 305907
        CJA17729 151824 152864
        CJA18102 198296 202214
        CJA18381 437556 437914
        CJA19424 259819 258728
        CJA20173 270454 269782
        CJA20590 389584 388473
        CJA23124 184993 185385
        CJA25473 297933 298226
        CJA25919a 52810 45250
        CJA25919b 52810 45250
        CJA26484 299140 298468
        CJA31047 10927 12423
        CJA32273 218040 216816
        CJA32354 400925 400368
        CJA32607 317548 320181
        CJA34847 362049 356884
        CJA34980 440273 440792
        CJA36584 232002 230774
        CJA36875 424248 424502
        CJA36931 353790 350355
        CJA37360 423953 423591
        CJA38292 239031 236149
        CJA38546 432940 432260
        CJA39516 218575 220017
        CJA40568 155611 159003
        CJA41359a 375284 374147
        CJA41359b 375284 374147
        CJA41359c 375284 374147
        CJA42094 186805 187140
        CJA43155 228186 227460
        GBG_japonica_K03A1.4a 425075 423591
        GBG_japonica_W01B11.5a 10927 12448
        GBG_japonica_Y46D2A.3 45746 45250
        GBG_japonica_C07D8.6 127002 128044
        GBG_japonica_F58A4.1 40351 42496
        GBG_japonica_T25G12.6 40338 42572
        GBG_japonica_F46H5.2b 384491 385942
        GBG_japonica_C54D1.1 271439 278815
        GBG_japonica_C10A4.6 184034 185385
        GBG_japonica_Y57E12B.4 40396 42396
        GBG_japonica_F46H5.2a 384166 385942
        GBG_japonica_C54D1.5 266912 260558
        GBG_japonica_F46H5.7a 353790 350355
        GBG_japonica_H08M01.2c 49449 47403
        GBG_japonica_ZK867.3 317490 320181
        GBG_japonica_T08A9.12 446925 446558
        GBG_japonica_ZK867.2 314345 316746
        GBG_japonica_C08A9.1 363497 364733
        GBG_japonica_C30H6.1b 40298 42305
        GBG_japonica_T08A9.3 112601 113988
        GBG_japonica_F15H9.1 49819 47843
        GBG_japonica_T10A3.1e 399307 391210
        GBG_japonica_C36E6.2 62445 64489
        GBG_japonica_C30H6.1k 40579 42305
        GBG_japonica_C36B7.5a 203482 208502
        GBG_japonica_T10A3.1b 399307 391886
        GBG_japonica_F46H5.8 377652 375966
        GBG_japonica_K03A1.5 434207 437453
        GBG_japonica_W01B11.5c 10927 12448
        GBG_japonica_F46H5.3b 338433 336738
        GBG_japonica_C54D1.3c 252241 256327
        GBG_japonica_C30H6.1l 40298 42305
        GBG_japonica_T08A9.8 446925 446558
        GBG_japonica_C36E6.5 65696 65025
        GBG_japonica_ZK867.1b 329343 331779
        GBG_japonica_ZK54.2a 81643 72821
        GBG_japonica_C36B7.5b 203482 208502
        GBG_japonica_C30H6.1h 40579 42305
        GBG_japonica_C55B6.1a 308366 313940
        GBG_japonica_C36B7.7 228119 227460
        GBG_japonica_F46H5.6 388287 386559
        GBG_japonica_C54D1.4 259819 257853
        GBG_japonica_C36B7.6 198296 202214
        GBG_japonica_F46H5.11 390004 388473
        GBG_japonica_F59A6.3 40341 42736
        GBG_japonica_ZK54.1a 72502 70438
        GBG_japonica_C55B6.1b 311223 313940
        GBG_japonica_C30H6.1i 40579 42305
        GBG_japonica_K03A1.4b 423788 423633
        GBG_japonica_F35E2.5 40717 42305
        GBG_japonica_F10D11.1 363497 364733
        GBG_japonica_Y43F8C.16 40473 43063
        GBG_japonica_F46H5.3a 338505 336738
        GBG_japonica_C54D1.3b 246572 256327
        GBG_japonica_C06G1.2 40503 43063
        GBG_japonica_F46H5.7c 353790 350355
        GBG_japonica_C54D1.7 270463 269804
        GBG_japonica_C54D1.6 282677 279106
        GBG_japonica_F46H5.7b 353790 350355
        GBG_japonica_C30H6.1a 40344 42305
        GBG_japonica_ZK54.1b 72885 70438
        GBG_japonica_C30H6.4 40344 42736
        GBG_japonica_C01G8.6 49605 47098
        GBG_japonica_C07D8.5 127002 128044
        GBG_japonica_T21D12.11 40344 42572
        GBG_japonica_ZC204.6 48808 47124
        GBG_japonica_C30H6.1e 40579 42305
        GBG_japonica_ZK867.1d 323837 331779
        GBG_japonica_T08A9.10 447130 446558
        GBG_japonica_C30H6.1n 40368 42305
        GBG_japonica_F15D4.4 49762 47843
        GBG_japonica_T08A9.11a 114604 114696
        GBG_japonica_ZK867.1e 323837 331779
        GBG_japonica_ZC178.2 40338 42736
        GBG_japonica_C54D1.2 257210 257802
        GBG_japonica_F46H5.2c 384166 385572
        GBG_japonica_C25G4.1 40338 42877
        GBG_japonica_C30H6.1c 40433 42305
        GBG_japonica_ZK867.1f 323837 332099
        GBG_japonica_T08A9.11b 114604 115206
        GBG_japonica_Y8A9A.2 49741 45250
        GBG_japonica_T10A3.1a 399307 391210
        GBG_japonica_C30H6.1m 40365 42305
        GBG_japonica_F28C6.10 40758 42305
        GBG_japonica_R106.2 101845 98911
        GBG_japonica_F46H5.4 372019 356884
        GBG_japonica_C54D1.3d 252241 256327
        GBG_japonica_C54D1.3e 246572 256327
        GBG_japonica_F46H5.5 376034 374147
        GBG_japonica_F35B12.7 53270 53025
        GBG_japonica_ZK867.1c 323837 332099
        GBG_japonica_T08A9.9 446925 446558
        GBG_japonica_R09B5.2 53331 53025
        GBG_japonica_Y70G10A.2 49852 47843
        GBG_japonica_K03A1.2b 413774 417481
        GBG_japonica_T10A3.1f 399307 391210
        GBG_japonica_Y38H6C.8 257210 257802
        GBG_japonica_C36E6.3 65696 65025
        GBG_japonica_T08A9.7 437556 437914
        GBG_japonica_Y116A8A.4 40289 42305
        GBG_japonica_C56G3.1b 174262 182607
        GBG_japonica_C30H6.1p 40298 42305
        GBG_japonica_C30H6.1g 40347 42305
        GBG_japonica_K03A1.2c 413774 417481
        GBG_japonica_C30H6.1d 40433 42305
        GBG_japonica_T08A9.2 115693 116297
        GBG_japonica_T10A3.1d 399307 391210
        GBG_japonica_C49C3.13 40359 42305
        GBG_japonica_W04G5.9 40380 42305
        GBG_japonica_ZK54.3 72885 72168
        GBG_japonica_T10A3.1c 399307 391210
        GBG_japonica_T08A9.1 118709 124268
        GBG_japonica_M01G12.7 214644 215597
        GBG_japonica_K03A1.2a 413774 417481
        GBG_japonica_C56G3.1a 179933 182607
        GBG_japonica_C30H6.1o 40298 42305
        GBG_japonica_M01G12.14 213630 215597
      Transcript (106)
      Pseudogene: CJA47980 406130 406058
      Feature_object (79)
      Feature_data: Cjap.Contig18181:Confirmed_intron_RNASeq:1 1 300000
        Cjap.Contig18181:Confirmed_intron_RNASeq:2 300001 451989
        Cjap.Contig18181:Dust 1 451989
        Cjap.Contig18181:inverted 1 459523
        Cjap.Contig18181:RNASeq:1 1 300000
        Cjap.Contig18181:RNASeq:2 300001 451989
        Cjap.Contig18181:RNASeq_forward_reads:1 1 300000
        Cjap.Contig18181:RNASeq_forward_reads:2 300001 451989
        Cjap.Contig18181:RNASeq_polyA:1
        Cjap.Contig18181:RNASeq_polyA:2
        Cjap.Contig18181:RNASeq_reverse_reads:1 1 300000
        Cjap.Contig18181:RNASeq_reverse_reads:2 300001 451989
        Cjap.Contig18181:RNASeq_SL1:1
        Cjap.Contig18181:RNASeq_SL1:2
        Cjap.Contig18181:RNASeq_SL2:1
        Cjap.Contig18181:RNASeq_SL2:2
        Cjap.Contig18181:TRF 1 451989
        Confirmed_intron_EST:Cjap.Contig18181_1 1 150000
        Confirmed_intron_EST:Cjap.Contig18181_2 150001 300000
        Confirmed_intron_EST:Cjap.Contig18181_3 300001 450000
        Confirmed_intron_Trinity:Cjap.Contig18181 1 451989
        Confirmed_intron_Trinity:Cjap.Contig18181_1 1 150000
        Confirmed_intron_Trinity:Cjap.Contig18181_2 150001 300000
        Confirmed_intron_Trinity:Cjap.Contig18181_3 300001 450000
        Confirmed_intron_Trinity:Cjap.Contig18181_4 450001 451989
      Homol_data (50)
  DB_info: Database: NDB NDB_ID Scaffold18181
        NDB_AC GL475329
        NDB_SV GL475329.1
  Origin: From_laboratory: RW
    Species: Caenorhabditis japonica
  Properties: Genomic_canonical
    Checksum: MD5: 0a86800144ff8333a8006d4488a79987
  Method: Genomic_canonical