WormBase Tree Display for RNAi: WBRNAi00086594
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| WBRNAi00086594 | Homol | Homol_homol | F38A6:RNAi | ||
|---|---|---|---|---|---|
| Sequence_info | DNA_text | atgacatcgccatccagtgatgaggacattattgatataagggtcatcaaagaggagccagagtcggaacctgactctgaagccgagccagccacaaccacgaattcaacggattcagaagattctgtggaacaggaaaataaaaagttattggaaaccgagaagaatcgaaaacgcgagcagaaacataaaatgttgccaaatggaaccacttctgggacctccgacacgggaaatcaggtgcctgccacgtcgtcggctgcttcaagtgtagactatacggccatgaacgctcaggactatctgccgacgtattctaatactacgttaaactaccaaccatatcagtaccagactgctgccaatggacttctgaactacaacaactacagccagtatgccactgctaatcagctcggatcgaactacatcagcccagccaatttcatgcaaggaggaggaatttcacctcttggttttaccactggcaccaccggagccaccacagcggccgcttccgtggccacgtcgtccgcctcagcggtcatcggaagaagcaatggacgatcaagctcgacggttgctgcatcgccagccgataggtcttattctggtgtaagcggagggcaaggccaagaactcacgattcaggaatttgaaactgtcacggaaaagatcagaagacatggaacttatggacaatcgaaacctccatactcttacattagcttaattactatggcaattcaaaagtctaattctagacaattgacattgtctgaaatctacaattggatcatggatttgttcccttactatcagaacaatcaacaaagatggcaaaactcaattcgccactccctctccttcaatgattgctttgtaaaggttgccaggtcccctgacaagcctggaaagggatccttctggactcttcacgagcactgtgggaatatgtttgagaatggatgctacctccgtaggcagaagagattcaaggtcaaggaacgtgagccatcgagaaagaagagaaatgccaactcccaacaattgcatcaacaacaacacattccaaaaatggaaatcaaagaagaggatccaacatccatcacgaccacatcatcacttggtgcttattctctgatccctcaaatttctacaaagaaggagatcaaggaagagctgaaagctgtgcaagatgcaactgcagctgctgccaatcttggcctaattgacccatcgggaacgccgtcggctgttaatcacagtcaacctacttcagtgatctcaagtgttggcacactaggaaccacgcaagcacagatgacactcaatggtcaatacgcgtctccttacctctacagttcggattttgccacaattctcccacaatcccagaatttcctgaacaacacactctacaacacaacgagcagttatccaggaattgactacaccaacggagtataccagaatactctttacagctccaccaacccgaactcggccgccaacctata | |||
| Experiment | Laboratory | SM | |||
| Date | 28 Nov 2006 00:00:00 | ||||
| Genotype | chd-3(eh4) | ||||
| Treatment | pha-4 and gfp-expressing RNAi cultures were mixed at a ratio of 1:10-1:20 prior to spinning at 2000 rpm. Resuspended bacteria were plated onto NGM plates with 1 mM IPTG. Ratios that generated 10-51% lethality of N2 worms were used for the enhancement assays. | ||||
| Temperature | 20 | ||||
| Delivered_by | Bacterial_feeding | ||||
| Inhibits | Predicted_gene | F38A6.1a | Inferred_automatically | RNAi_primary | |
| F38A6.1c | Inferred_automatically | RNAi_primary | |||
| F38A6.1b | Inferred_automatically | RNAi_primary | |||
| Gene | WBGene00004013 | Inferred_automatically | RNAi_primary | ||
| Transcript | F38A6.1c.1 | Inferred_automatically | RNAi_primary | ||
| F38A6.1b.1 | Inferred_automatically | RNAi_primary | |||
| F38A6.1a.1 | Inferred_automatically | RNAi_primary | |||
| Species | Caenorhabditis elegans | ||||
| Interaction | WBInteraction000500880 | ||||
| Reference | WBPaper00029058 | ||||
| Phenotype | WBPhenotype:0001646 | Remark | chd-3(eh4) produced a synthetic no-pharynx phenotype with weak pha-4 RNAi | ||
| Penetrance | Range | 13 | |||
| Method | RNAi |
