WormBase Tree Display for RNAi: WBRNAi00084500
expand all nodes | collapse all nodes | view schema
| WBRNAi00084500 | Homol | Homol_homol | T05C12:RNAi | ||
|---|---|---|---|---|---|
| Y92H12A:RNAi | |||||
| C27A2:RNAi | |||||
| Sequence_info | DNA_text | cataaatagactcaaaattacatgaatgaatgaaaacgttagtcttactgaaatacatgaaaacagggcatagttttaaatattaataaagcatgtgggaattaaggcgagaatcggtaaaggcaatgagttttaaattttaagtccgtaaaatacgcgttctgctgttgctactgttctccccgtcgaaatcgtggttgactgcgttctgcgactgaatcggagaagctgctagaaccatagtactggatagaggagtcggcggagggcctcctaagccaccacttcctggaatttgtaactaatttggttggggaaatactgttatgtgaaaagtcatttggatacaaagggtacagtagtcaagaaacagcaaatactatatcaattgaaatgaatatttgcttcaaatttaactcctgcaccctatagaaacgattaattttctcaccgtttgtcaagcttgaggatgtcacttgagaaggtgccggtacctgacggtgattatttttcgtcccaaaaacatgataatttccgactggattcattccaatttggctttctccgaccatcgatgcgtaatcatttgtcataggactctcacaatctcgacgtcttcgaagccatgtttggtcatgagcaactgggcttagagtagtggtttctaatcgatgaggaatatttcttccaactcgtgctgccagagcatgtggtgctggtgagccaacatacgtcacttcagtagttgcttcaactcgcattgtagttccactcgtaccagtggtgtccgtggaattacgatcattgccaagaattccatcaccgaatacatagtagcacttttctgtgaatgtcaacttgctgacgacatgtctgataagaccagcagctaacaatctcgcagcatagattctagctttcttccgattatgaatatcagccatgtgatcaacgagccaatcgactagatctcggcctaaacgttgattgtttggatcctaatacttgaatgttcagtactcaccaataaaagacattggaaccaaaattttcagccattttcgatttttgacagctaatcctgaatccggacgagccatagaacgaacaacaataatgggatcaatcatttctgtgagttgctctattttttcattttgctcattttctcgttttctttctgcttcttcaatcaaagctcttggaattccatttctacgttgatcgtaaagcattcgctcctcatcatcagaagctgtcgatgtaaatggaagagttccgtcatcaattgtagttgccgtttgctcctgtggatccaaacccagagctttcattttttcagtgttctgcctgtaagtatcaaattaagaaaataaatcttgcgaggtacccttacacagcggtttctacccaaactccaacgtcgaggggcatcgtttcagacgccatggacgcgagtggatcatcatattcacttggggcacctcttgcaaacttactgatataaagagtaattggtctaaaaattaaaaaaaattaatgctaatgcgtagaaaaataccttttggaggatgcagcttctctgagcgaacgaactgcttgaggcccactgagttcttcaaaggatactctattaacttgaagaatctgatcaccaacgttcacacgtccatctttttcaacggcaccttctggtgcaatttcggaaacgaatatatgaccatcaattgtgcacacgctcagtcccagatatggaacatttttcattggtagataaatttccagaattcgagggaggccgctgttaacacttgattccgtcgctgagctaatagtacttggaacatacggtcttctgaatctttctttcttttgttttttccttcttctatcgtcatcgtatatcttattcatatcacgagcagcgagaggttcgtagagcgaagaatcatctcctgttcgacgtgtatgctcgtcatattgatacggatcctctgaatttgaagtgtataattctgccagatgctctcctgctcttcctgaaaaacgttcatacaggtttttaagagtacataaatagcaaaaactcactgctaacaatggtgctcggagcaagactagcatcagagtacggagtcgcgtcaaagtctgcacttcgtcggcggcgcttaaaatatcagttttttttgaaaataacagaaatcgaaccttatctagagcagttctctgtggtcgcgtcattgttccactgtttcgaggaagagttccatatcctggagtgctaacgagaaaaatctcataaaatccattctgggatttgcgcagccgatccgaatcag | |||
| acgtttattattgaacatgaaaagtgctgatatcaaattaaaagtcgctatttagatgagaacatgaaaaaggcagtggatgtcgagagattaaaaatgacaaatatcccgttgggaggaatacacagttaacacaaattaaaacatatcaaaaaatacagagaaacaagaacatctactaatcaattatcaatgttaaactgtggatgacttccgttcattgcagctcgaaacgagcttctcgaagcgacgcggtccagatcaacagctaaaccagacccactgctgagtgatgcaggcttccgtggtagttcgacgtacctaaaggaataaaacgttttaaattttttttaaatgatttatcaatctgcaccttctcgagcttcctctactactcccactcgcttgacttctctgatcatctcgcgtccttctgcaatcattgacagatgcctttccgtgaggaaatggagacgccggtagtgatgcgtatccgccagtcattgaagaaggtagaatgaccgaatttcgatgattgcactgcgccagctgttggcggttgtggtgggtacattgatggagggaagatcagattgttgctgctatgaccagacgcagatgatgcgtgactttgtggatacttgtatcctccgtcaggtcctcgcagttgggtgtagtctagaaaatgaattttaaatgttttaaattggaatttttcttcaaatccttacctgcacactcatctcccatgacgtagtagcattctttcgtaaaactctgctttccaactccaggtctgatgtatccaagcttcaacatttcctcagcaaactcacgagctttcttcttcgtctcaagcccttgaacatgcttgacaagccactcgactagatcagttcccaagaaagacatggggattgggatcttaaaccagtaacgatccttgatgtcaagacctgatcctggagctgccattacttctactacatatttcttatccgtcatcacgttcaaacagttagctggcggaggcccgccaaacggagttccactcgcagaactgttcgttggccaatcatctggaatgggcgttgacgagctttctgtaaggaaaaattcttttaatttcagacttaaaatgtaaatgtcctcaccttcagatatacttggcattgccttcatagcattcgtggcatgcttcacccattcgtttggatcaattggccgaattggctctgcacgtggatttctcggaaaagcattttgctttggatctccagtttttgcaatcgtcaatgtcaagtattgacgctgaactgcctctcgtaacagttgtactgcttccttgttcgagtaatttcccaaactaatttcattgattccaacgatcatatctccaatatcaattctaccatccagtgcaacagctccacgatcctgaatatctccaacgtaaagaccagcatctcctcgagcgttggtatgtcctgaaggcgtcattccaagtggtattgtttcaaggttcaaacgaacagtgattacttctagacccattgacgattctaaaaaaaggacaggattattgaattggaattcgagaatacaaaaatttagacaaactaagtatacacaccggtgatgcttgaaaatgaagatgaagccgtcgagattgatggcattcgtttccacttgttcctcatttcctt | |||||
| atgggttgcctgttttcaaaagagcggcgatcgggaggcagtgatatgggtgtttccgaacggatagatgtctccagattccaaacgccccaacaacagacagtattccacgtgaataacggtggaaacgagggaaccatctctcaactaaacggaacatcagacggaatgatgggaaatggacgtggtggtggtggtggaggaggagcacaggaacgtgagactctggtcgccctctatccatacgattcacgtgccgacggggatcttagctttcaaaaaggcgatgctatgtacctattggatcattcgaattgtgattggtggtatgttcgacaccaacgaaccggacagactggttatgtgccgaggaattttgttgccaagcaacagactattgagagtgaagaatggtacgcaggaaagataccaagaaatcgtgccgaacgactcgttttatcatcacatctaccaaaaggaacattcttgataagagaacgagaagccgacacaagagaattcgcattgacaattcgagataccgatgatcagagaaatggtggaacagtaaaacactacaaaatcaaacgactggatcacgatcaaggatatttcattacaacacgacgaacattccgttctcttcaagaacttgtcagatattattccgacgttccagacggcctatgctgtcaacttacattcccagcacctcgcctagcgccaactcgacccgatttatcacatgatacacaacagaattgggaaattccacgcaatcagttgcacctgaaacggaagcttggtgatggtaatttcggagaagtttggtatggaaaatggcgcggaattgttgaggtggcgattaagacgatgaagcctggtactatgtcacctgaagctttcttgcaagaagcccaaataatgaagcaatgtgatcatccgaatcttgtaaaactgtatgcagtgtgtacacgtgaagaaccattctacattataaccgaatacatgataaatggctcacttcttcaatatcttcgaaccgacggaagcaccctcggaattcaggcgctcgtcgatatggccgcacaaattgcgaacggaatgatgtatttggaggagaggaagcttgtgcacagagatttggccgctcgtaacgttcttgtcggagataagatttccggagttccagttgttaaagttgccgactttggtttggcgcgaaaattgatggaagaggacatttacgaggcacgaaccggcgcgaaattcccgattaaatggacggcacccgaggcggcgacttgtggaaattttacggtgaaaagtgatgtatggtcgtatggtatcttgttatatgagattatgacaaagggacaggttccgtatccgggaatgcacaatcgtgaagtcgtcgaacaagtcgagctgggctaccgtatgccaatgccacgtggctgcccggagcaaatctacgaagaagtactgctcaaatgttgggataagacgcccgatcggcggccgactttcgacactttatatcactttttcgacgattatttcgtgtcgacgcagccgaattacgcgccaccaagtgcctaa | |||||
| Experiment | Laboratory | WM | |||
| Date | 22 Mar 2002 00:00:00 | ||||
| Delivered_by | Injection | ||||
| Inhibits | Predicted_gene | T05C12.6c | Inferred_automatically | RNAi_primary | |
| Y92H12A.1b | Inferred_automatically | RNAi_primary | |||
| Y92H12A.1d | Inferred_automatically | RNAi_primary | |||
| Y92H12A.1c | Inferred_automatically | RNAi_primary | |||
| C27A2.6 | Inferred_automatically | RNAi_primary | |||
| T05C12.6b | Inferred_automatically | RNAi_primary | |||
| Y92H12A.1a | Inferred_automatically | RNAi_primary | |||
| T05C12.6a | Inferred_automatically | RNAi_primary | |||
| Gene | WBGene00001102 | Inferred_automatically | RNAi_primary | ||
| WBGene00005077 | Inferred_automatically | RNAi_primary | |||
| WBGene00003241 | Inferred_automatically | RNAi_primary | |||
| Transcript | Y92H12A.1c.1 | Inferred_automatically | RNAi_primary | ||
| T05C12.6a.1 | Inferred_automatically | RNAi_primary | |||
| Y92H12A.1d.1 | Inferred_automatically | RNAi_primary | |||
| Y92H12A.1b.1 | Inferred_automatically | RNAi_primary | |||
| C27A2.6.1 | Inferred_automatically | RNAi_primary | |||
| T05C12.6b.1 | Inferred_automatically | RNAi_primary | |||
| Y92H12A.1a.1 | Inferred_automatically | RNAi_primary | |||
| T05C12.6c.1 | Inferred_automatically | RNAi_primary | |||
| Species | Caenorhabditis elegans | ||||
| Interaction | WBInteraction000500026 | ||||
| Reference | WBPaper00005375 | ||||
| Phenotype | WBPhenotype:0001637 | Remark | src-1(RNAi) enhances the no intestine phenotype of dsh-2(RNAi),mig-5(RNAi). | ||
| Penetrance | Range | 100 | |||
| Remark | Entire sequence of clone (yk46b11 and yk55h11) used for RNAi not known as only the ends of the sequence were determined. Exact sequence used for src-1 RNAi not stated by authors, spliced coding region sequence of gene used for curation. | ||||
| Method | RNAi |
