WormBase Tree Display for RNAi: WBRNAi00084499
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| WBRNAi00084499 | Homol | Homol_homol | Y92H12A:RNAi | |||
|---|---|---|---|---|---|---|
| T05C12:RNAi | ||||||
| C27A2:RNAi | ||||||
| Sequence_info | DNA_text | cataaatagactcaaaattacatgaatgaatgaaaacgttagtcttactgaaatacatgaaaacagggcatagttttaaatattaataaagcatgtgggaattaaggcgagaatcggtaaaggcaatgagttttaaattttaagtccgtaaaatacgcgttctgctgttgctactgttctccccgtcgaaatcgtggttgactgcgttctgcgactgaatcggagaagctgctagaaccatagtactggatagaggagtcggcggagggcctcctaagccaccacttcctggaatttgtaactaatttggttggggaaatactgttatgtgaaaagtcatttggatacaaagggtacagtagtcaagaaacagcaaatactatatcaattgaaatgaatatttgcttcaaatttaactcctgcaccctatagaaacgattaattttctcaccgtttgtcaagcttgaggatgtcacttgagaaggtgccggtacctgacggtgattatttttcgtcccaaaaacatgataatttccgactggattcattccaatttggctttctccgaccatcgatgcgtaatcatttgtcataggactctcacaatctcgacgtcttcgaagccatgtttggtcatgagcaactgggcttagagtagtggtttctaatcgatgaggaatatttcttccaactcgtgctgccagagcatgtggtgctggtgagccaacatacgtcacttcagtagttgcttcaactcgcattgtagttccactcgtaccagtggtgtccgtggaattacgatcattgccaagaattccatcaccgaatacatagtagcacttttctgtgaatgtcaacttgctgacgacatgtctgataagaccagcagctaacaatctcgcagcatagattctagctttcttccgattatgaatatcagccatgtgatcaacgagccaatcgactagatctcggcctaaacgttgattgtttggatcctaatacttgaatgttcagtactcaccaataaaagacattggaaccaaaattttcagccattttcgatttttgacagctaatcctgaatccggacgagccatagaacgaacaacaataatgggatcaatcatttctgtgagttgctctattttttcattttgctcattttctcgttttctttctgcttcttcaatcaaagctcttggaattccatttctacgttgatcgtaaagcattcgctcctcatcatcagaagctgtcgatgtaaatggaagagttccgtcatcaattgtagttgccgtttgctcctgtggatccaaacccagagctttcattttttcagtgttctgcctgtaagtatcaaattaagaaaataaatcttgcgaggtacccttacacagcggtttctacccaaactccaacgtcgaggggcatcgtttcagacgccatggacgcgagtggatcatcatattcacttggggcacctcttgcaaacttactgatataaagagtaattggtctaaaaattaaaaaaaattaatgctaatgcgtagaaaaataccttttggaggatgcagcttctctgagcgaacgaactgcttgaggcccactgagttcttcaaaggatactctattaacttgaagaatctgatcaccaacgttcacacgtccatctttttcaacggcaccttctggtgcaatttcggaaacgaatatatgaccatcaattgtgcacacgctcagtcccagatatggaacatttttcattggtagataaatttccagaattcgagggaggccgctgttaacacttgattccgtcgctgagctaatagtacttggaacatacggtcttctgaatctttctttcttttgttttttccttcttctatcgtcatcgtatatcttattcatatcacgagcagcgagaggttcgtagagcgaagaatcatctcctgttcgacgtgtatgctcgtcatattgatacggatcctctgaatttgaagtgtataattctgccagatgctctcctgctcttcctgaaaaacgttcatacaggtttttaagagtacataaatagcaaaaactcactgctaacaatggtgctcggagcaagactagcatcagagtacggagtcgcgtcaaagtctgcacttcgtcggcggcgcttaaaatatcagttttttttgaaaataacagaaatcgaaccttatctagagcagttctctgtggtcgcgtcattgttccactgtttcgaggaagagttccatatcctggagtgctaacgagaaaaatctcataaaatccattctgggatttgcgcagccgatccgaatcag | ||||
| acgtttattattgaacatgaaaagtgctgatatcaaattaaaagtcgctatttagatgagaacatgaaaaaggcagtggatgtcgagagattaaaaatgacaaatatcccgttgggaggaatacacagttaacacaaattaaaacatatcaaaaaatacagagaaacaagaacatctactaatcaattatcaatgttaaactgtggatgacttccgttcattgcagctcgaaacgagcttctcgaagcgacgcggtccagatcaacagctaaaccagacccactgctgagtgatgcaggcttccgtggtagttcgacgtacctaaaggaataaaacgttttaaattttttttaaatgatttatcaatctgcaccttctcgagcttcctctactactcccactcgcttgacttctctgatcatctcgcgtccttctgcaatcattgacagatgcctttccgtgaggaaatggagacgccggtagtgatgcgtatccgccagtcattgaagaaggtagaatgaccgaatttcgatgattgcactgcgccagctgttggcggttgtggtgggtacattgatggagggaagatcagattgttgctgctatgaccagacgcagatgatgcgtgactttgtggatacttgtatcctccgtcaggtcctcgcagttgggtgtagtctagaaaatgaattttaaatgttttaaattggaatttttcttcaaatccttacctgcacactcatctcccatgacgtagtagcattctttcgtaaaactctgctttccaactccaggtctgatgtatccaagcttcaacatttcctcagcaaactcacgagctttcttcttcgtctcaagcccttgaacatgcttgacaagccactcgactagatcagttcccaagaaagacatggggattgggatcttaaaccagtaacgatccttgatgtcaagacctgatcctggagctgccattacttctactacatatttcttatccgtcatcacgttcaaacagttagctggcggaggcccgccaaacggagttccactcgcagaactgttcgttggccaatcatctggaatgggcgttgacgagctttctgtaaggaaaaattcttttaatttcagacttaaaatgtaaatgtcctcaccttcagatatacttggcattgccttcatagcattcgtggcatgcttcacccattcgtttggatcaattggccgaattggctctgcacgtggatttctcggaaaagcattttgctttggatctccagtttttgcaatcgtcaatgtcaagtattgacgctgaactgcctctcgtaacagttgtactgcttccttgttcgagtaatttcccaaactaatttcattgattccaacgatcatatctccaatatcaattctaccatccagtgcaacagctccacgatcctgaatatctccaacgtaaagaccagcatctcctcgagcgttggtatgtcctgaaggcgtcattccaagtggtattgtttcaaggttcaaacgaacagtgattacttctagacccattgacgattctaaaaaaaggacaggattattgaattggaattcgagaatacaaaaatttagacaaactaagtatacacaccggtgatgcttgaaaatgaagatgaagccgtcgagattgatggcattcgtttccacttgttcctcatttcctt | ||||||
| atgggttgcctgttttcaaaagagcggcgatcgggaggcagtgatatgggtgtttccgaacggatagatgtctccagattccaaacgccccaacaacagacagtattccacgtgaataacggtggaaacgagggaaccatctctcaactaaacggaacatcagacggaatgatgggaaatggacgtggtggtggtggtggaggaggagcacaggaacgtgagactctggtcgccctctatccatacgattcacgtgccgacggggatcttagctttcaaaaaggcgatgctatgtacctattggatcattcgaattgtgattggtggtatgttcgacaccaacgaaccggacagactggttatgtgccgaggaattttgttgccaagcaacagactattgagagtgaagaatggtacgcaggaaagataccaagaaatcgtgccgaacgactcgttttatcatcacatctaccaaaaggaacattcttgataagagaacgagaagccgacacaagagaattcgcattgacaattcgagataccgatgatcagagaaatggtggaacagtaaaacactacaaaatcaaacgactggatcacgatcaaggatatttcattacaacacgacgaacattccgttctcttcaagaacttgtcagatattattccgacgttccagacggcctatgctgtcaacttacattcccagcacctcgcctagcgccaactcgacccgatttatcacatgatacacaacagaattgggaaattccacgcaatcagttgcacctgaaacggaagcttggtgatggtaatttcggagaagtttggtatggaaaatggcgcggaattgttgaggtggcgattaagacgatgaagcctggtactatgtcacctgaagctttcttgcaagaagcccaaataatgaagcaatgtgatcatccgaatcttgtaaaactgtatgcagtgtgtacacgtgaagaaccattctacattataaccgaatacatgataaatggctcacttcttcaatatcttcgaaccgacggaagcaccctcggaattcaggcgctcgtcgatatggccgcacaaattgcgaacggaatgatgtatttggaggagaggaagcttgtgcacagagatttggccgctcgtaacgttcttgtcggagataagatttccggagttccagttgttaaagttgccgactttggtttggcgcgaaaattgatggaagaggacatttacgaggcacgaaccggcgcgaaattcccgattaaatggacggcacccgaggcggcgacttgtggaaattttacggtgaaaagtgatgtatggtcgtatggtatcttgttatatgagattatgacaaagggacaggttccgtatccgggaatgcacaatcgtgaagtcgtcgaacaagtcgagctgggctaccgtatgccaatgccacgtggctgcccggagcaaatctacgaagaagtactgctcaaatgttgggataagacgcccgatcggcggccgactttcgacactttatatcactttttcgacgattatttcgtgtcgacgcagccgaattacgcgccaccaagtgcctaa | ||||||
| Experiment | Laboratory | WM | ||||
| Date | 22 Mar 2002 00:00:00 | |||||
| Delivered_by | Injection | |||||
| Inhibits | Predicted_gene | T05C12.6c | Inferred_automatically | RNAi_primary | ||
| Y92H12A.1b | Inferred_automatically | RNAi_primary | ||||
| Y92H12A.1d | Inferred_automatically | RNAi_primary | ||||
| Y92H12A.1c | Inferred_automatically | RNAi_primary | ||||
| C27A2.6 | Inferred_automatically | RNAi_primary | ||||
| T05C12.6b | Inferred_automatically | RNAi_primary | ||||
| Y92H12A.1a | Inferred_automatically | RNAi_primary | ||||
| T05C12.6a | Inferred_automatically | RNAi_primary | ||||
| Gene | WBGene00001102 | Inferred_automatically | RNAi_primary | |||
| WBGene00005077 | Inferred_automatically | RNAi_primary | ||||
| WBGene00003241 | Inferred_automatically | RNAi_primary | ||||
| Transcript | Y92H12A.1c.1 | Inferred_automatically | RNAi_primary | |||
| T05C12.6a.1 | Inferred_automatically | RNAi_primary | ||||
| Y92H12A.1d.1 | Inferred_automatically | RNAi_primary | ||||
| Y92H12A.1b.1 | Inferred_automatically | RNAi_primary | ||||
| C27A2.6.1 | Inferred_automatically | RNAi_primary | ||||
| T05C12.6b.1 | Inferred_automatically | RNAi_primary | ||||
| Y92H12A.1a.1 | Inferred_automatically | RNAi_primary | ||||
| T05C12.6c.1 | Inferred_automatically | RNAi_primary | ||||
| Species | Caenorhabditis elegans | |||||
| Interaction | WBInteraction000500025 | |||||
| Reference | WBPaper00005375 | |||||
| Phenotype | WBPhenotype:0001235 | Remark | dsh-2(RNAi),mig-5(RNAi) enhances the defect observed with src-1(RNAi) in that more embryos have left-right EMS daughters instead of typical anterior-posterior daughters. | |||
| Penetrance | Range | 94 | ||||
| EQ_annotations | Anatomy_term | WBbt:0006876 | PATO:0000460 | |||
| Remark | Entire sequence of clone (yk46b11 and yk55h11) used for RNAi not known as only the ends of the sequence were determined. Exact sequence used for src-1 RNAi not stated by authors, spliced coding region sequence of gene used for curation. | |||||
| Method | RNAi |
