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WormBase Tree Display for RNAi: WBRNAi00069915

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Name Class

WBRNAi00069915HomolHomol_homolY74C9A:RNAi
Sequence_infoDNA_texttttgttgtttactagtgtcacgacaacaaatacagcggccgacatctcgtaagcccgtttttgacaacgtttactgattcggccgtatctcgaaaactaatttttttctgaaaatgttgttaaagtgaaatagttttcatgttatttgttatcatttgtgtttattcactttgttctgaaaaatccagtaaaaaagttatgggagtgcaaacttgtcgctcactgccactcacccgctacaatcaaaaatcaggttacttatagttagttctaattttttttttgtagagcattttttagaaataacacatgtaaaatcacaatgaagctatattcaaacacgatatcaagattcaggaaaaaattcattgtttgcgagaaatgttcaaggcgtggccaaacactattcaagtttaatctctcataactctttttctggatttttcagaacaaagtgaatagacataaatgatgacaagtagtatgaaaactatttcactttaacaacacctcgaaaaaaaaatcgctctcgagatacggccgaatcagtaaacgttgtcaaaaacgggctcacgagatgtcggccgctgtattttttgtcgtggcactggtaaaaaacttaaaaaattgaatacaagtagacgcaattatgggcaatacttcatcagttaaacttttttcgataacatttctagttttaaagttttgctcgtttggaaaagttgtaaagttatcaaaaatcgaaaatggcatatgtttttggccggccctgtaggttaaatattttcgttatcaggtgtaggcatgaatcgccatgtaggcgggcgtaggtatcttctaggtaggcgtaggttacctgagtcaaattataggcagacgtaagtaatcataaaaattgacactttgtgggcaggcgtaggtcaccttttagacaatcatagttagctttctaagtagggttaggacacctattataggcaggtttaattcctcttatatgtgtgcgtagaacacgttatagtcaggtgtaggtcactttgtaggcaagtctaggttcttctttcggcaggcgaaggtcatcttctgagcaagttaaggttcgccttgtaggtcggtgtaggttgcctcgtaggcagactaagttaccttctgggcatgcctagattgactagtaggcaggtgttggcaccaagggtgtcagtgtcccgtaaaaattacaaaaacgggacaacgggatgtcccgttcccgtgaaaattttaaaaacgggacaacgggacgtcccgttcccacgaaaacacccaaaaaacgggacaacgggacatcccgttcccgtgaaaacgctcaaaaacgggacaaaagacgtcccgttcccgtaaaaatgacaaaaacgggacaccgggacgtcccgttcccgtgataattttgaaaacgggacaacgggacgtcccgttcccgtgaaaacacccaaaaaacacccaaaaaaacgggacaacgggacaaacgggacacgggacttgacacccttggttggcaccactgaagaatgctgaaaccgacttttttttcaaaaatgtcctgctcaacgagccgaatgcattttggtcggattatattggcacacctttttgcccccgagagaatcattgaacaaaatctcatgcactttcaatttcatttttcatttcatcaaataaaaagattcgggaggatttgatatatattggaaaaataaatgaatgggggatttgtatggtgggggaaaagtgcacacccggaaatgagcagtaggattttgagcaggaaattgaaggagctggagcaggagagcagctacagtaaccaccccttcacagcaaaacacatggctcataaaattgaatatttgaagtgaactactagtgataagcggtgaaacggggtatgtggcactaatttttttttcttcaaaaaacccatttcttatcacttgtgtgcagaagcattatggagacaggcaggaggcaagtggtggtctaaaaattagaaaagttcggccacagcttgcccgataggagcacacgggcatactgtttcaacaaaaattcgaaaaaattggaaaatcccggaattttgattccgcggaatccgacgattaaagaaattctcgcgtttctgatttcacggaaatcggtattctcgaaatttggtttctgcggtgtctattgttttggaaatgttgtgttcatgttttatgaagaacaatataatattatgtataatagatattatatattatatataatagaataattttagtaaaaaccccacaaaacttcgaaaatagaagaaattctcgcgtgtctccaaaattacaaaaaaatcagtttttttcctttattttatattacacaggatatttatatcaattcagcaaaaaaacgggcgggacagaaaattaagaaatttgcgaatattcgttcccacggaagtaaatttccccgaattagaaaaaattcgaatttttactggatttgtctcaagcttttgaatctagaaacattttctagtaaaatctctttaaaaaattttttacaccaaaaaactttttaggccctgaattctgcgaattaaaaaattccgcaagagaccacacaaaatcgagagacttagttagacaagtagagggaaaaataagaggcaacaaatcatcgaaagtttttttctgcagagagaatgggggagaagttgcggcgctgaaagagagagaaagagagagagagacagagagggtgagagatataacagaaaaccaggatagtgcggaggaagagaagaaaaaagtgttagaaatatttgtccgtcgacgccttcttcgtcttcttcgtcgccttcataaatgaaactatgcattttcctcagatattgccttactattaaatggggcccgggctaaagggtgtggccggccgatccaaaacggtggcctagaaaaatatcggcggtggccgatatcaaataaaaaaaacatcgatagttatgagaccataatttttagtttttcagattttgagtcacttttctgatttttatcccaaaaatagagctctttgctgtttttctgcagaatcagcaggtggcaacttggttttcggaatttgtgctattcttagaaattcccgacacagcatcgagttttactggagaacacgtagcgagcacagaaaaaggaaggaaagacaagaattggctcggcgagcaaccagaaaagcagcaagaaaaaactgaccgagcaaagaacagcgcgatggggctcatatatatctaaaaatggatggatggagagatgagagacagcagcagtattcggtcaaatgaagacaagccaatttcgaagcttatttggtattcatgcgtgtctttttttttcttgcaagaaaaactgatcattagcagaaaattcaaaaaatattggttgtccgagaggagtacagaaattaaaaaaaatcgtccgaaaggagtacaaaattcaaaatgtctattatccaagagaagtacaaaattcaaaagtgtatattgtccgagaggagtacaagatccaaaatatgaattgtccgagaggagtaaaaattcaaaccacaaaaatccgaatttgccaagaaaggggcggagcctgattcgagtggagtgtcgttgcaaaacgcaaaacttcaaaaacatacggttttcaaaatctacctcgccgacctaccgtaaccctctaaaatttctaggatcaaatatcatcgcaagaaaagtgttcgttcgaaacgaaaaatatttctgacgcctcatcaatcatcatatcagtaacaaaaacctgagagagacggaaacaaagaaatatattttgaaccgaacagggatcctgcaacaaatcacgtaatggacaaaatgcgccctattgctaaatatgcagcaagacgcaattgcattcttctgccagaatatcgatttttatacgtacttatagtgataaaaaaaatgctgaattatcgatttttaattccccggaaaaatgtgcgacagagcgtgtttgcattttttttttcgaattttcgtgcagaaaaacccgtaagcatcgatttttctcagtaaaaatttctcgcgccaaaattgtttctatttttttcgggaaaaatcgaaaatctccaaaacttcggtggagcgcactttctggaccacaatttttgaagggaaacatcactttctgcggttttcaataaacgaacaaacatcaacaagaaacgagagagagtttttgttgactttcaagaaaaaaatggatatcgaatttctgtgctccatttccctctccgggaaatggcgcggggaacgtgcaaacaatgcgagtatgtctaatggctctcacgtagatcgagaaagtggaaaatttgctagtatagacagtttaaggaggctcttttattctattggggaaccgatttgtttatgtcttgccgtggagcgtagttactgtaatttttttgcaaacgtgctccatcgaacagtaaaaaaatcagtatgcatactagtatgtacctttaaatagctgtaacacgaattgcctgtgaaaataaaaatctcggcaagttctctccatcggatcaatgtagggaattttgctgtttataatgcaaactcgctctaataaactacaattttcgatcggtatttcatgcatttcgactgattttcgttattttttatgtacgctctctattgaaacacggggcccgagaaaatatccaaaatctagagaggttgtattgcttaggcttagccgaaaacctgtaaagattttttaaaaattgttcagcctgcgatggacgactttttgtaaaacttggccaccaacttttttacggtgcggctacatcgcatttgggtgacctttaatgtgttcagggtgtctaaacatgcacccaaaagagagtgtcyk1104a10
ExperimentLaboratoryGS
Date05 Sep 2005 00:00:00
GenotypeLIN12(+)::GFP
Temperature25
Delivered_byBacterial_feeding
SpeciesCaenorhabditis elegans
ReferenceWBPaper00026869
PhenotypeWBPhenotype:0001400RemarkLIN12::GFP is internalized, but not downregulated in P6.px cells. In control animals, LIN12::GFP is downregulated in P6.px of the primary vulval linage.
WBPhenotype:0001645Remarkwwp-1(RNAi) inhibits degradation, but not internalization of LIN12::GFP as scored in P6.px of the primary vulval linage
Phenotype_not_observedWBPhenotype:0000220Remarklateral signaling between primary and secondary vulval precursor cells is not prevented as judged by the presence of AJM-1 antibody staining in the granddaughters of secondary cells P5.p and P7.p
RemarkEntire sequence of clone used for RNAi not known as only the ends of the sequence were determined. The only target shown is the best match.
MethodRNAi