WormBase Tree Display for RNAi: WBRNAi00062611
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WBRNAi00062611 | Homol | Homol_homol | C34F11:RNAi | |||
---|---|---|---|---|---|---|
T05C12:RNAi | ||||||
Sequence_info | DNA_text | tgaaatacatgaaaacagggcatagttttaaatattaataaagcatgtgggaattaaggcgagaatcggtaaaggcaatgagttttaaattttaagtccgtaaaatacgcgttctgctgttgctactgttctccccgtcgaaatcgtggttgactgcgttctgcgactgaatcggagaagctgctagaaccatagtactggatagaggagtcggcggagggcctcctaagccaccacttcctggaatttgtaactaatttggttggggaaatactgttatgtgaaaagtcatttggatacaaagggtacagtagtcaagaaacagcaaatactatatcaattgaaatgaatatttgcttcaaatttaactcctgcaccctatagaaacgattaattttctcaccgtttgtcaagcttgaggatgtcacttgagaaggtgccggtacctgacggtgattatttttcgtcccaaaaacatgataatttccgactggattcattccaatttggctttctccgaccatcgatgcgtaatcatttgtcataggactctcacaatctcgacgtcttcgaagccatgtttggtcatgagcaactgggcttagagtagtggtttctaatcgatgaggaatatttcttccaactcgtgctgccagagcatgtggtgctggtgagccaacatacgtcacttcagtagttgcttcaactcgcattgtagttccactcgtaccagtggtgtccgtggaattacgatcattgccaagaattccatcaccgaatacatagtagcacttttctgtgaatgtcaacttgctgacgacatgtctgataagaccagcagctaacaatctcgcagcatagattctagctttcttccgattatgaatatcagccatgtgatcaacgagccaatcgactagatctcggcctaaacgttgattgtttggatcctaatacttgaatgttcagtactcaccaataaaagacattggaaccaaaattttcagccattttcgatttttgacagctaatcctgaatccggacgagccatagaacgaacaacaataatgggatcaatcatttctgtgagttgctctattttttcattttgctcattttctcgttttctttctgcttcttcaatcaaagctcttggaattccatttctacgttgatcgtaaagcattcgctcctcatcatcagaagctgtcgatgtaaatggaagagttccgtcatcaattgtagttgccgtttgctcctgtggatccaaacccagagctttcattttttcagtgttctgcctgtaagtatcaaattaagaaaataaatcttgcgaggtacccttacacagcggtttctacccaaactccaacgtcgaggggcatcgtttcagacgccatggacgcgagtggatcatcatattcacttggggcacctcttgcaaacttactgatataaagagtaattggtctaaaaattaaaaaaaattaatgctaatgcgtagaaaaataccttttggaggatgcagcttctctgagcgaacgaactgcttgaggcccactgagttcttcaaaggatactctattaacttgaagaatctgatcaccaacgttcacacgtccatctttttcaacggcaccttctggtgcaatttcggaaacgaatatatgaccatcaattgtgcacacgctcagtcccagatatggaacatttttcattggtagataaatttccagaattcgagggaggccgctgttaacacttgattccgtcgctgagctaatagtacttggaacatacggtcttctgaatctttctttcttttgttttttccttcttctatcgtcatcgtatatcttattcatatcacgagcagcgagaggttcgtagagcgaagaatcatctcctgttcgacgtgtatgctcgtcatattgatacggatcctctgaatttgaagtgtataattctgccagatgctctcctgctcttcctgaaaaacgttcatacaggtttttaagagtacataaatagcaaaaactcactgctaacaatggtgctcggagcaagactagcatcagagtacggagtcgcgtcaaagtctgcacttcgtcggcggcgcttaaaatatcagttttttttgaaaataacagaaatcgaaccttatctagagcagttctctgtggtcgcgtcattgttccactgtttcgaggaagagttccatatcctggagtgctaacgagaaaaatctcataaaatccattctgggatttgcgcagccgatccgaatcagttgttaattcgactttaacttctctgaacatttttcagtacagaataattacaaaaattaaaaaagccaaaactcaccgttgaatatccgggtcaagttccttcgcataatacttatatccacgcttggtgaatgaatttttgaaatttccaagcgtcgctactccttctctggcttcaataacagaaacatagggagtcgtttcatcgtcgagatagtagaagacctggaagaaaattatttctgtttaatcactggcttaataaaaaacaattctgatcaaaattcttacttttatctggctgcagtctgatgt | yk216a12 | |||
atgctactgagaaatgagggggcgagaaaataacaatgatatcgaatataaacaataattttagggcaaatgcaatagaaaacaagacgttttttttcttagtatagggtgcatctatttcagacaaggatgtggggaactcgtgaagaagatcgcaattcgtgtgaatttgagaaggaaatgcaacaaaaaatcgacggacagattcaaaaatagaataatcaaataaaggaaaaacatccaaaattacaatcaccgggaacatatgaaattttgattcatgattggagacttagaagttacaaaatattaaattagaacttattgtaataccgggtacatggtgtactgtgagagaaactattttgaattatgccattttggcattgattaccagacataatgaaacataaacatgaagaaaaatgatgacattctaaatgtgcattacatacatgcgcgattcgccgtcgcttaccattgacggagccatccctttaaaagctccaggagggccagccatacctccaggtaaatgtgggggtgggagcatcacagagcttccgttgccagcagacattccgttcattccgatggtccattggtatttgggtccaccatcttcatttcggaatcgggcatagtctggaagtaatttagaagatataacaagaagggttgaatttcatgttttgaatcaggcagggcagccttgaatgcaaccaacttttttgcattcctatggagattacaggcagacatttttgtgcatcagtgaaaaatttgttttaaaaatataatttgaaaaaaataattttttaaaacaaatttttaacatttcagttcaaaaaaattgcattaaagatttcaaaagacccacttccatcttcatatacaaaaactttgacattttccgaataaatgtatactttcctacctgaacactcatctccaaggacataatagcactgctcagtgaatgtgaccttgttcaccacatgtgcaatatactttaatttcagtaaatccgccgcaaagtttcgtgctgtcttccgttctcgaagcccttcaacatgatccaaaagccattcgaccagatcagatcctaaaattgagaattagaataggctctacacgttcattcaaaacttacccaagaacgacatgggaatcggaattttgagccatgttcgatttttgatatcaagaccagagccaggcatagcattatttcgacaaccttctttttgtcagtgtgtatatcaagaataatatgagctccgccgccgactactgtattttgaccatttgatccgtttgaggtcaccgttgagctgcttggcggtcgaccatgaggccattcaccaggaattggtgtcggtgcactttctggaaaaaattttttaattaatagatatttgtaggagaataacgtagaagaagaacaaaaaacaacatcgaggctgtcttcctgcctgcctacctgttttcaaaattttggtgcagaaaaaaggtttgacttaattttacattcagccttcaaaattagagatgtgaaaaatttcatatttttatttttgtttcaaaaaaaaattgaaaattccaaaaagctttccaaatgttgttctactttaaaatatcctaaaacatcagaagtctgaaaaacatcaacttgaaagtagcgaagaaatgcactgaataaatttcagcctgaagttgaataggttgagagtgcagcttataattttgcaaaaaataaaaagatcaatcaaataacaggcaggtattttgtttagtttttctacacttccaatcaaaaaaccataccttcaactatacttggcattcctctcattgcattcgtatgctggatccatgcttgagtatcgattggtctcacaggctcttctctgctattccttggtattgtgaaacaactttgcccattttcaaaacttttcgccacagttaatttgatggggccacgacggctaacagcttctctgaaaattcatatgttgaagaataagctctcagtaaaaaataataatttttaccgtaacacatcaacagcttgatcgttagtgaaattctcaaagctggtctcattgacttgtaaaatcatatcaccagcttcaattcttccatccaatgccactgcacctcccttcatgatatttgctacgtagattccattatcaccacaattagaagtttgaccaacaattgaaatgccaaggaaattgactgtatccatattgaggttcactgttattacatcaaggctcatagaggactctggaattcgaatggtaaaagttatgctaatttcgaagaggtcatacctgtgatacttgaaaacgaagatgctctagagggttttcggaaatttcttttattcttctttttctttgccattttttcatgttgtcgggatactgatgtgaaatcggttgttgtagagcctctgaaaaattgaacgttttatagttgaaattgttatagatttttcagaattttcagtccaacttttgaaaattgagtcttattgagaaacttaaagaagctttgcatattcgatgccccacaaaataaatacaaatgattttaaaatttaaaaaaaaactgtagaaattttttaaaatcgaattattaatttatgataagcgaaaactggttaatttccattttggactgtaaataaaaatttcataattttttgaaaatcttactgtggttttcagtgatttttgcaactcgtgagtaactttgaacgttatcaactaaaattttacatggttttcactagctaaaaaaggaaaactaatgagaattgtgttccgtgaaattctaaatataagcggagcactgcacaaaacaaaatgttcaaattccttaaagttacaacctagaagtttgttccacaaaatccgaaaagaactgaaagatttatcgaaagcaattatccacttctcatccatctctttccacccgttctcacgtccttttcttcccctccccaatttttattagtttccttcaaatagtgcacaacactaagagcttgttgtgatagtcactaccaggctttagctagaagataagcgccaagcaggaattgctcaaatttaacgagctgtgtcttatcgcagaataaatgaactgacacgtcgcgagttgtggcacccgtgctgctcggcggagctgttccaattgcatagtaataatcagaagttgaagtggaagttgttgaataataggctttaccatcagagcttgcgaaatcatcgtcagttatgtagccgctcatttcactatttgaggagcggaagggcgaaatcattgggggcagagtgagcggggatgaaggcccgctttaagcctagtcatttgtcactttatgtgacagacagagaagacacaaaaaaaggtattaactatttgagaggcaaaatgaaaaccatcgaatttttgaaaatatttaaaatttaaaatttcaaaggggtattgcctattcgtaaacttggttttgtttttatgagttgttatattttgaatgtaaatttttttcaatgttgcatattccttgagatagccctgcaagacctgaatgtagccctattataacttaaacttttgctttaattttttataaataaaaatttgccgaataaaatacactaaattttgaaaggaacactgtcaccagagtactggctttacataaaaattcaatgaaatgaaacctatgtttataaaattaaaaaaaaaaacatacctatcatcatcatctgaaaatactcttgcatcggattcggagccaattgttgattcttcgagatgtcgtcggtgccctggaatttaagaaaacttagaattcgatgctttttcaaattttcataagattttgttttttgaacctattaccctttacttgatcacatcatttttcgccatcatttacctaccgatcaaataaaacgatgcatctgcactaagttcagaggttaaggatagatgtgacgtcctatgtagaaatccaataagatgtcttctcggcgaagcatccggtgcaacatctttccttccttgataagtacttgttgtatttgatccgccgtaccttcgcattctgcgcttctgtgctcgatccgctctctcctcttccaccattgccgctgtacttgctgtttcttcctcataaagtggcggaagcgatggactagttggaatcagtgacattgtacggctcattgtgcttcttcgtgaaacaagaggtcggcaatcagatgatagaccacttccatctacagtgaccggccgacacctatcgattcggttcaaacttcgactttcagatatagtaatactaggaataataggtggacgatcggtggttatttgacacgttttggattttctgagctccctagatggcggagcaagtgaaacaggggaatcaggagccgcaaggaaaaagttggtctggctaatgctgcagctggtgcaatgagatccggtggtggtggctgaggtgggctcagattctctttgaattctttagtattagatcgagaacttgatggtgatggagatgcagaccgagattttgaaccaccaagtgaagttaaagacgttaaacttgcagccgagtgggacaatctgataagagctccaaaaaacgatgaagaggcggaaccaccaccggactcttttccgttggcgcctcctgcacttttttcgctttgtttccgtcgttgtaaaaatctgcgcttcgttgtcgtcttagtattatccccctcttcgtcgttacaatcatctgatgctttgctggtgccgggaaacaggagagccccctcgctgagccgttttttaagtggaccaccgagcgcatttgagaccatctgtcgccatgtggatccggcaggtgtatgattatttgtgagatcagttaaagtccgttttaatcgaaatggtgcctcagactccggctccacacgacttttacttctgctcttcttcaactttttccccgtacttggttgctgctggcttcctgaattttccttatcatcagaagctttggaggaagggagaatgttgttcagaattttcaaatttcctaatggatttcctgtatatttcttccttcttggactttttacaacttccgagacgatagttttctcatcatcaaccaaatcaagatcatcaatcttagcaagtggtggagcctttttcttcttttttggtcttgacgatgtatttgtaggtgacgttttcaactcaatcttgttaatcaattgtgatacaactcccggcgagtgttgtcgatttggtggaggagccgtgtatgtcgaacggacttttcgttcttttgaagtgaataataatgagcgaatcatatcagatgaagtggatggggtatttgaggagccagaaggagatggaagggctctatctcgagctccaagcttgatactcattgctcgctagtgagctatgagcaatcgtgtcgttctctagaaaatcggttttaagtttttgatagtaatagagctgggaagtaataaaaaagcttgaaggtaataaaaagaagagaaagaaacgagaaacacacctcgatggggggtcataaatttcccagcatcccatcttgtggctcatgatgcacttggattagaaacagatactttcgttttacttttatcatgtgctgggaatttagagagaaactgagaatttaatagtcgacacatcgggaaagttggtactcaaaataatcctgttgacaccataaacactgtcgttaaactttaatcggacttgacatatgtcatgttaaatctcaattgactcgactatgatagtgacatctaaaattgataaattcctatataatgagaaatgcaaagattgagatattataattttaatataatataattggtctatgagtttgttaagattcaagccataacagtagaaaaatttaaaaaaaactcaagtttttatacgcttaaatctcgatgttattttgaaagacaaatgtttgctttcatttaacttttatttaattaatcgttaacattcactgatacatctaataaaattaaaattatagttcaatacgtttcggtcgaaactatgtggctatcaattaataagattttccccgtttcgcaaaagagcttcagaataagtgttaccatttctcaactaacaaatttcttcaactggtgggctggaaaatggcacatgacaactaaaaccaagagctcactatcagttatttatatcaacaaattgcaacttgacttatggctcacagtcaaacaccgcagagatccagaggaaaacacaatttgctatggtcagattaaatggcagttgcttaaagaatattgatcgaaaatttttcatcatgactagttgaacaaagagttgcaaattgatctcactgaaacatgttgcaatggctcttgatgatgacgaagtataaaatcaaatgtttgaatccacctacacacatgggctagcaaacattgatcggaggcaggaaaagcggataaagcatagaaaagatcattatcaaactgtcttttctccccaaaatcccgataggtatcatgatagaaatcacaagtgagggatatccgaaagtaaataaaaccacagatctcactattataaggcagatatctattttcgtgttaacgagaatgagagcaatattatgagatcctggggtgggtactagagactatttcgacacaaaaacgataatagtgacaagtagaaacatacacagaaatcgacaagtgagcggacaaaaaaaactaactaaaagtggggtgaagtggtatgaggtctcgagaagagtgttcaagtggagagagagacagaaggaaagcatcttgataaacactgtgataaactcatcggtcttcgggttttcattcccactgacgtcgagcacagagatatagagaacggtttctcacaaaaagtggtggagcaagcaaggagcccggttgaccccctaacagagaagttcaaggactaatgttacaaaagatcgagaattggatgtcaaagaacatatttttccaattaacaatgcttacaaattctaccgtacactacagttcttaaggtcgcaaagagatatttttggtatctggttaataattttttattctctaatgtcgaagctaaactaaactagctgtgacttgttcgcaatttaccattttcagatgtcattgtcagatatttcagaacaaaaatttttgaaataaaacagctgggtagcctttcaatgcaactagatatcctgaaaataataatctatttgtttcaaaagtaacaaaatactttttttttaattttcaacaaaagagagtttggatgaatttctaatttggaggaaaattaaaacagattataaaatacgaattttatagaatttgagaatatgctcctcagattaaattttcagaaaaacacaatgaactaaaatactttgaaaagaagttgtacacaaaagggagaatttcaattgatttatacacccagctaccaggtaataaccacaattatgtgattttaattccacgtaatcacactggggaaatcatcgatatgtatgtgtgtgtgtgtgattaaattgaaatgaaatgaaatgtatgtataaacattgaatgaaagcaaagaaggaggagatctccactcattgaaatgtgtgttggttggttgactggcagccagccaacaagatgagcccagaagatagaattgaaacaattggtcctttctctgtgctctctcatttctttatgatctatgagaagtgatctgggagatcggctcattaacaccaacataaaacatgaaaatcaacggaaggacatgatggggtgaaagtgttgaaatgatgtgatcaagattttatgaggggaagttttattgggttcactgacacaatgtaaaagtttgcgagaactttcttaagaactttttgagacgaggtttttcttccaattttttctgaaacacttgggaccaagttcatcgtgtttcccgtttctcaattaccccaaaagctaatgtttgtttttttaccatacaaagccttgagccatctaagcattcacaaaaatgctcactagccttgacaactggctatacgtgtaattaggcacttttgtgattgcatgagaggcccacagattattgtgcagaactatttaaagtgttttttttttgaaatcgagtatatacccgttttccaaaaaacaaaaaagaaactaacccaaataatgttgtggaaaccgtcgattataggcagcactcttcaagtatccaggaattgctgccgagatcattgattccgaatcggtgctcatcactgaaattcaggttgcgttgaatgtatcaacaatagttatagttctttgaaaaagaaacaaaatagacccagaaactggatcacggggaccatagggagggaaataaaatgagaattaaacagacatctggaggtttatgacttgagggtatgaagacaattttactagatgaattgaatttttaatttcttttgtcattgggggttccgctaaagttttccgctaaattttttctactgggccccaaagaaattcctagattatttggagccaattaattccgatacagttcttatttcctagagagttgccaagtccgaatttcatatattttctgacataattttttgaaattaaaaaaaaatcaaatttctggcaagccaaagattttcatgttggatttttctgggcgccgatcaaacttgacttgccagtttttttttaaatttttctatgatttattatcattttttataaataattttatcgaatattttctgagcttctctctaacatttttcgattgaaaaaactcactggaattatcaaattgataagcagcatgttgataattcataggtggtccatttcgatttgaaggcgccggtccaggtactgaaggatattttcgcatcttcccactacttccatccgaatgagttgatccttcaattgtcaaaagaaagagctcaaaaaggttatttggtgagggagtga | yk397b6 | |||||
Experiment | Laboratory | SU | ||||
Date | 05 Oct 2005 00:00:00 | |||||
Genotype | dsh-2(or302) | |||||
Delivered_by | Injection | |||||
Inhibits | Predicted_gene | T05C12.6c | Inferred_automatically | RNAi_primary | ||
C34F11.9a | Inferred_automatically | RNAi_primary | ||||
C34F11.9f | Inferred_automatically | RNAi_primary | ||||
C34F11.9d | Inferred_automatically | RNAi_primary | ||||
C34F11.9c | Inferred_automatically | RNAi_primary | ||||
C34F11.9e | Inferred_automatically | RNAi_primary | ||||
C34F11.9b | Inferred_automatically | RNAi_primary | ||||
T05C12.6b | Inferred_automatically | RNAi_primary | ||||
T05C12.6a | Inferred_automatically | RNAi_primary | ||||
Gene | WBGene00001101 | Inferred_automatically | RNAi_primary | |||
WBGene00003241 | Inferred_automatically | RNAi_primary | ||||
Transcript (11) | ||||||
Species | Caenorhabditis elegans | |||||
Reference | WBPaper00024624 | |||||
Phenotype | WBPhenotype:0001102 | Remark | embryos with ABar spindle misalignment | |||
Penetrance | Range | 95 | ||||
EQ_annotations | Anatomy_term | WBbt:0006411 | PATO:0000460 | |||
Life_stage | WBls:0000003 | PATO:0000460 | ||||
Remark | Entire sequence of clone used for RNAi not known as only the ends of the sequence were determined. The only target shown is the best match. | |||||
Method | RNAi |