WormBase Tree Display for Pseudogene: Y35H6.3
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Y35H6.3 | SMap | S_parent | Sequence | CHROMOSOME_X | |
---|---|---|---|---|---|
Structure | Source_exons (17) | ||||
DB_info | DB_remark | coding pseudogene | |||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Type | Coding_pseudogene | ||||
Attributes | SubType | unprocessed_pseudogene | |||
Visible | Gene | WBGene00021342 | |||
Brief_identification | Curated pseudogene | ||||
Corresponding_PCR_product | TH:189-d1_1 | ||||
cenix:189-d1_1 | |||||
Corresponding_oligo_set (12) | |||||
Variation (220) | |||||
Microarray_results | A_12_P144390 | ||||
GPL14144_Y35H6.3_147-206_0.934_1_A | |||||
GPL19516_CGZ0037720 | |||||
GPL19516_CGZ0043802 | |||||
GPL21109_VY35H6BL.1 | |||||
GPL21109_Y35H6.3 | |||||
GPL8304_CE_WBGene00021342_A | |||||
GPL8673_VY35H6BL_2P00001 | |||||
GPL8673_VY35H6BL_2P00020 | |||||
GPL8673_VY35H6BL_2P00046 | |||||
RNASeq_FPKM (74) | |||||
Last_reviewed | 01 Oct 2013 00:00:00 | WBPerson1983 | |||
Remark | [131001 pad] Merged the genes Y35H6.3, VY35H6BL.1 and VY35H6BL.2 into a single Pseudogenic loci as this appears to be a degraded copy of Y38F2AR.5. This copy suffers multiple frame shifts, internal stops and sequence loss events. The repeat content of this region of the genome points to multiple transposon/excision events. | Curator_confirmed | WBPerson1983 | ||
From_analysis | RNASeq_Hillier_elegans | ||||
Method | Pseudogene |