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WormBase Tree Display for Pseudogene: Y35H6.3

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Name Class

Y35H6.3SMapS_parentSequenceCHROMOSOME_X
StructureSource_exons (17)
DB_infoDB_remarkcoding pseudogene
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
TypeCoding_pseudogene
AttributesSubTypeunprocessed_pseudogene
VisibleGeneWBGene00021342
Brief_identificationCurated pseudogene
Corresponding_PCR_productTH:189-d1_1
cenix:189-d1_1
Corresponding_oligo_set (12)
Variation (220)
Microarray_resultsA_12_P144390
GPL14144_Y35H6.3_147-206_0.934_1_A
GPL19516_CGZ0037720
GPL19516_CGZ0043802
GPL21109_VY35H6BL.1
GPL21109_Y35H6.3
GPL8304_CE_WBGene00021342_A
GPL8673_VY35H6BL_2P00001
GPL8673_VY35H6BL_2P00020
GPL8673_VY35H6BL_2P00046
RNASeq_FPKM (74)
Last_reviewed01 Oct 2013 00:00:00WBPerson1983
Remark[131001 pad] Merged the genes Y35H6.3, VY35H6BL.1 and VY35H6BL.2 into a single Pseudogenic loci as this appears to be a degraded copy of Y38F2AR.5. This copy suffers multiple frame shifts, internal stops and sequence loss events. The repeat content of this region of the genome points to multiple transposon/excision events.Curator_confirmedWBPerson1983
From_analysisRNASeq_Hillier_elegans
MethodPseudogene