WormBase Tree Display for Pseudogene: Y26D4A.18b

Y26D4A.18b SMap: S_parent: Sequence: Y26D4A
  Structure: Source_exons: 1 82
      326 507
      567 871
  DB_info: DB_remark: coding pseudogene
  Origin: From_laboratory: HX
    Species: Caenorhabditis elegans
  Type: Coding_pseudogene
  Attributes: SubType: unprocessed_pseudogene
  Properties: Isoform: From_analysis: RNASeq_Hillier_elegans
  Visible: Gene: WBGene00045235
    Brief_identification: Curated pseudogene
    Corresponding_PCR_product: mv_Y26D4A.5
      sjj_Y26D4A.5
    Corresponding_oligo_set: 172293_x_at
      A_12_P109223
      A_12_P153100
      A_12_P177449
      Aff_Y26D4A.E
    Variation (24)
    Microarray_results: SMD_Y26D4A.5
      172293_x_at
      A_12_P109223
      A_12_P153100
      A_12_P177449
      Aff_Y26D4A.E
    RNASeq_FPKM (74)
    Last_reviewed: 26 Jul 2012 00:00:00 WBPerson1983
    Remark: [120726 pad] This model belongs to a very complicated loci where it is difficult to fully model the transcript data as coding genes. The locus has been curated as a set of 3/2 coding genes and 2/3 pseudogenic loci. The common theme is that there appears to be 5 repeated sequences within the cluster and that there is light transcriptional activity connecting the loci and adding additional exon structures. One theory is that this is a cluster of 5 ncRNAs that get transcribed as a single unit and then post processed to produce active products. Curator_confirmed: WBPerson1983
        From_analysis: RNASeq_Hillier_elegans
  Method: Pseudogene