WormBase Tree Display for Pseudogene: F07H5.3a
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| F07H5.3a | Evidence | Inferred_automatically | make_isoforms.pl | ||
|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F07H5 | ||
| Structure | Source_exons | 1 | 297 | ||
| 349 | 514 | ||||
| 604 | 782 | ||||
| 829 | 979 | ||||
| DB_info | DB_remark | coding pseudogene | |||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Type | Coding_pseudogene | ||||
| Attributes | Transcribed | ||||
| SubType | unprocessed_pseudogene | ||||
| Properties | Isoform | Accession_evidence | NDB | C55507 | |
| Visible | Gene | WBGene00014307 | |||
| Brief_identification | Curated Pseudogene | ||||
| Corresponding_PCR_product | cenix:102-h10 | ||||
| mv_F07H5.3 | |||||
| sjj_F07H5.3 | |||||
| Corresponding_oligo_set (11) | |||||
| Variation (15) | |||||
| Microarray_results (12) | |||||
| RNASeq_FPKM (74) | |||||
| Last_reviewed | 14 Jul 2006 00:00:00 | WBPerson1983 | |||
| Remark | 951221: Cannot predict a viable gene which incorporates the EST predicted splices. Possibly has a spliced 3' UTR. | ||||
| [alt] Alternate isoform defined by EST data. | |||||
| [040219 pad] Gene prediction changed into a non-coding-transcript in accordance with current policy. It is not possible to create a full length valid prediction as there are no ORFs large enough for exons 2 and 3 to be accommodated. | Curator_confirmed | WBPerson1983 | |||
| [060714 pad] Converted into pseudogenic isoforms as you can't create a coding CDS isoform, therefore you cannot have 2 ncisoforms under current policy. | Curator_confirmed | WBPerson1983 | |||
| Method | Pseudogene |
