WormBase Tree Display for Pseudogene: C17H1.1
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| C17H1.1 | Evidence | Inferred_automatically | make_isoforms.pl | ||
|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C17H1 | ||
| Structure | Source_exons | 1 | 48 | ||
| 94 | 333 | ||||
| 422 | 676 | ||||
| 781 | 1161 | ||||
| 2295 | 2696 | ||||
| DB_info | DB_remark | coding pseudogene | |||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Type | Coding_pseudogene | ||||
| Attributes | Transcribed | ||||
| SubType | unprocessed_pseudogene | ||||
| Visible | Gene | WBGene00007654 | |||
| Brief_identification | Curated Pseudogene | ||||
| Corresponding_PCR_product | cenix:193-c3 | ||||
| mv_C17H1.1 | |||||
| sjj_C17H1.1 | |||||
| Corresponding_oligo_set | 178530_at | ||||
| A_12_P151870 | |||||
| A_12_P151871 | |||||
| Aff_C17H1.1 | |||||
| GPL19516_CGZ0005164 | |||||
| GPL21109_C17H1.1 | |||||
| Variation (71) | |||||
| Microarray_results | SMD_C17H1.1 | ||||
| 178530_at | |||||
| A_12_P151870 | |||||
| A_12_P151871 | |||||
| Aff_C17H1.1 | |||||
| GPL19516_CGZ0005164 | |||||
| GPL21109_C17H1.1 | |||||
| RNASeq_FPKM (74) | |||||
| Last_reviewed | 12 Jan 2006 00:00:00 | WBPerson1983 | |||
| Remark | CAB07165.1 | ||||
| [060112 pad] Gene prediction converted into a pseudogene following alignment with additional protein family members, this locu appears to suffer from an internal stop in exon 2 where the protein homology continues 5'. There has also been a Transposon insertion in the final intron making it >1.1kb. | Curator_confirmed | WBPerson1983 | |||
| Method | Pseudogene |
