WormBase Schema for Model: Sequence
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?Sequence | DNA | UNIQUE | ?DNA | UNIQUE | Int | ||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | UNIQUE | Canonical_parent | UNIQUE | ?Sequence | XREF | Genomic_non_canonical | ||
Genomic_parent | UNIQUE | ?Sequence | XREF | Nongenomic | |||||
AGP_parent | UNIQUE | ?Sequence | XREF | AGP_fragment | |||||
S_child (15) | |||||||||
Structure | From | Source | UNIQUE | ?Sequence | XREF | Subsequence | |||
Source_exons | Int | UNIQUE | Int | ||||||
Subsequence | ?Sequence | XREF | Source | UNIQUE | Int | UNIQUE | Int | ||
Overlap_right | UNIQUE | ?Sequence | XREF | Overlap_left | UNIQUE | Int | |||
Overlap_left | UNIQUE | ?Sequence | XREF | Overlap_right | |||||
Gap_right | UNIQUE | Int | Text | ||||||
Clone_left_end | ?Clone | XREF | Clone_left_end | UNIQUE | Int | ||||
Clone_right_end | ?Clone | XREF | Clone_right_end | UNIQUE | Int | ||||
Flipped | |||||||||
DB_info | Database | ?Database | ?Database_field | ?Text | |||||
Protein_id | ?Sequence | UNIQUE | Text | UNIQUE | Int | ||||
Secondary_accession | ?Text | ||||||||
DB_remark | ?Text | #Evidence | |||||||
Keyword | ?Keyword | ||||||||
DB_annotation | ?Database | UNIQUE | ?LongText | ||||||
EMBL_dump_info | #EMBL_dump_info | ||||||||
Origin (13) | |||||||||
Visible (15) | |||||||||
Properties | Genomic_canonical | Gene_count | UNIQUE | Int | |||||
Briggsae_canonical | |||||||||
Genomic | |||||||||
Checksum (2) | |||||||||
cDNA (5) | |||||||||
EST_consensus | |||||||||
RNA | UNIQUE | mRNA | UNIQUE | Processed_mRNA | |||||
Unprocessed_mRNA | |||||||||
tRNA | Type | UNIQUE | Text | ||||||
Anticodon | UNIQUE | Text | |||||||
rRNA | UNIQUE | Text | |||||||
snRNA | UNIQUE | Text | |||||||
snoRNA | UNIQUE | Text | |||||||
scRNA | UNIQUE | Text | |||||||
miRNA | UNIQUE | Text | |||||||
ncRNA | UNIQUE | Text | |||||||
Ignore | #Evidence | ||||||||
Show_in_reverse_orientation | |||||||||
Status | Received | UNIQUE | DateType | ||||||
Library_construction | UNIQUE | DateType | |||||||
Shotgun | UNIQUE | DateType | |||||||
Shotgun_complete | UNIQUE | DateType | |||||||
Contiguous | UNIQUE | DateType | |||||||
Finished | UNIQUE | DateType | |||||||
Submitted | UNIQUE | DateType | |||||||
Annotated | UNIQUE | DateType | |||||||
Archived | UNIQUE | DateType | UNIQUE | Text | |||||
Match_type | UNIQUE | Match_with_function | |||||||
Match_without_function | |||||||||
Link | |||||||||
Splices | Confirmed_intron | Int | Int | #Splice_confirmation | |||||
Predicted_5 | ?Method | Int | Int | UNIQUE | Float | ||||
Predicted_3 | ?Method | Int | Int | UNIQUE | Float | ||||
Cluster_information (2) | |||||||||
Map | ?Map | XREF | Sequence | #Map_position | |||||
Interpolated_map_position | UNIQUE | ?Map | UNIQUE | Float | |||||
Oligo | ?Oligo | XREF | In_sequence | Int | UNIQUE | Int | ?Method | ||
Defines_feature | ?Feature | XREF | Defined_by_sequence | #Evidence | |||||
Assembly_tags | Text | Int | Int | Text | |||||
Homol (4) | |||||||||
Method | UNIQUE | ?Method |