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WormBase Tree Display for Gene: WBGene00305988

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Name Class

WBGene00305988SMapS_parentSequencePPA_ChrV
IdentityVersion4
NameCGC_namePpa-ctn-1.2From_analysisInferred_from_orthology
Sequence_namePPA47364
Molecular_namePPA47364
PPA47364.1
PP75981
Public_namePpa-ctn-1.2
SpeciesPristionchus pacificus
HistoryVersion_change120 Jan 2020 15:09:48WBPerson4055EventSplit_fromWBGene00099262
204 Jun 2020 14:38:22WBPerson1983Name_changeCGC_namePpa-ctn-1.2
328 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
428 Jul 2021 11:12:29WBPerson1983Name_changeCGC_namePpa-ctn-1.2
Split_fromWBGene00099262
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classctn
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010.977083From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
2.93125From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00303666
00303667
00303668
00303669
Ortholog (38)
ParalogWBGene00111975Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00276993Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable actin filament binding activity and cadherin binding activity. Predicted to be involved in Rho protein signal transduction and cell adhesion. Is an ortholog of C. elegans ctn-1. In C. elegans, ctn-1 is involved in regulation of locomotion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA47364
Corresponding_transcriptPPA47364.1
Other_sequence (46)
Experimental_infoMicroarray_resultsGPL14372_Probes_4038
GPL14372_Probes_43012
GPL14372_Probes_43013
GPL14372_Probes_43014
GPL14372_Probes_43017
Expression_clusterWBPaper00041606:PP_X.nematophila_regulated
Remark[210528 pad] The CGC name Ppa-ctn-1.2 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene