WormBase Tree Display for Gene: WBGene00305013

WBGene00305013 SMap: S_parent: Sequence: PPA_ChrV
  Identity: Version: 4
    Name: CGC_name: Ppa-sptf-1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA47151
      Molecular_name: PPA47151
        PPA47151.1
        PP75422
      Public_name: Ppa-sptf-1
    Species: Pristionchus pacificus
    History: Version_change: 1 26 Sep 2019 11:31:24 WBPerson4055 Event: Split_from: WBGene00090599
        2 27 Nov 2019 12:48:14 WBPerson1983 Name_change: CGC_name: Ppa-sptf-1
        3 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
        4 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Ppa-sptf-1
      Split_from: WBGene00090599
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sptf
    RNASeq_FPKM: WBls:0000032 9.01104 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 127.765 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        45.592 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        9.01104 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
    Ortholog (24)
    Paralog: WBGene00093674 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00306027 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domain: Zinc finger C2H2 superfamily. Is an ortholog of C. elegans sptf-1. In C. elegans, sptf-1 is involved in neuron differentiation and positive regulation of gene expression. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA47151
    Corresponding_transcript: PPA47151.1
    Other_sequence: Oden_isotig21866
      EX913194.1
      HBC12355_1
      Acan_isotig12867
      Hbac_isotig03628
      Dviv_isotig17702
      JI174120.1
  Experimental_info: Microarray_results: GPL14372_Probes_51710
      GPL14372_Probes_51711
      GPL14372_Probes_51712
      GPL14372_Probes_51713
    Expression_cluster: WBPaper00041207:PP_dauer_up
  Remark: [210528 pad] The CGC name Ppa-sptf-1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene