WormBase Tree Display for Gene: WBGene00276969
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WBGene00276969 | SMap | S_parent | Sequence | PPA_ChrIV | ||
---|---|---|---|---|---|---|
Identity | Version | 6 | ||||
Name | CGC_name | Ppa-nhr-67 | From_analysis | Inferred_from_orthology | ||
Sequence_name | PPA38600 | |||||
Molecular_name | PPA38600 | |||||
PPA38600.1 | ||||||
PP53240 | ||||||
Public_name | Ppa-nhr-67 | |||||
Species | Pristionchus pacificus | |||||
History | Version_change (6) | |||||
Status | Live | |||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | nhr | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | ||
RNASeq.pristionchus.WBls:0000032.control_median | ||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||||||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||
RNASeq.pristionchus.WBls:0000101.control_mean | ||||||
RNASeq.pristionchus.WBls:0000101.control_median | ||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | ||||||
RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
GO_annotation | 00283328 | |||||
00283329 | ||||||
00283330 | ||||||
00283331 | ||||||
Ortholog (40) | ||||||
Paralog (62) | ||||||
Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-67. In C. elegans, nhr-67 is involved in several processes, including gonad morphogenesis; negative regulation of G1/S transition of mitotic cell cycle; and positive regulation of transcription by RNA polymerase II. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | PPA38600 | ||||
Corresponding_transcript | PPA38600.1 | |||||
Other_sequence | Acan_isotig03065 | |||||
Acan_isotig03064 | ||||||
ACC25038_1 | ||||||
Acan_isotig03063 | ||||||
EY458629.1 | ||||||
EX549836.1 | ||||||
ACC12903_1 | ||||||
JI176573.1 | ||||||
AE04275 | ||||||
AYC04572_1 | ||||||
Experimental_info | Microarray_results | GPL14372_Probes_38761 | ||||
Remark | [190208 pad] The CGC name Ppa-nhr-67 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||
[210528 pad] The CGC name Ppa-nhr-67 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||
Method | Gene |