WormBase Tree Display for Gene: WBGene00275542
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WBGene00275542 | SMap | S_parent | Sequence | PPA_ChrV | ||||
---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | ||||||
Name | Sequence_name | PPA37173 | ||||||
Molecular_name | PPA37173 | |||||||
PPA37173.1 | ||||||||
PP52144 | ||||||||
Public_name | PPA37173 | |||||||
Species | Pristionchus pacificus | |||||||
History | Version_change | 1 | 24 Nov 2017 16:14:21 | WBPerson4055 | Event | Created | ||
Status | Live | |||||||
Gene_info | Biotype | SO:0001217 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | ||||
RNASeq.pristionchus.WBls:0000032.control_median | ||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||||||||
WBls:0000101 | 14.0748 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||
0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
42.2243 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | ||||||
RNASeq.pristionchus.WBls:0000101.control_median | ||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | ||||||||
Ortholog (75) | ||||||||
Paralog (59) | ||||||||
Structured_description | Automated_description | Is predicted to encode a protein with the following domains: C-type lectin fold; Spermadhesin, CUB domain superfamily; Lectin C-type domain; CUB domain; C-type lectin-like/link domain superfamily; and C-type lectin-like. Is an ortholog of C. elegans clec-41; clec-42; and clec-43. In C. elegans, clec-41 is involved in positive regulation of chemotaxis. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | |||||||
WBPerson37462 | ||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||||
Molecular_info | Corresponding_CDS | PPA37173 | ||||||
Corresponding_transcript | PPA37173.1 | |||||||
Other_sequence | PPC01892_1 | |||||||
GPC00312_1 | ||||||||
PP01084 | ||||||||
Experimental_info | Microarray_results (7) | |||||||
Expression_cluster | WBPaper00041207:PP_dauer_down | |||||||
WBPaper00041606:PP_X.nematophila_regulated | ||||||||
Method | Gene |