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WormBase Tree Display for Gene: WBGene00275139

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Name Class

WBGene00275139SMapS_parentSequencePPA_ChrIII
IdentityVersion1
NameSequence_namePPA36770
Molecular_namePPA36770
PPA36770.1
PP64006
Public_namePPA36770
SpeciesPristionchus pacificus
HistoryVersion_change124 Nov 2017 16:14:21WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000322.47638From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010.82546From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00282209
Ortholog (30)
Paralog (20)
Structured_descriptionAutomated_descriptionPredicted to enable nucleic acid binding activity. Is an ortholog of C. elegans rde-1. In C. elegans, rde-1 is involved in obsolete conversion of ds siRNA to ss siRNA involved in RNA interference; regulatory ncRNA-mediated heterochromatin formation; and regulatory ncRNA-mediated post-transcriptional gene silencing.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA36770
Corresponding_transcriptPPA36770.1
Other_sequencePPC19179_1
FC817300.1
FC817503.1
FC811909.1
Experimental_infoMicroarray_resultsGPL14372_Probes_61995
GPL14372_Probes_61996
GPL14372_Probes_61997
GPL14372_Probes_61998
GPL14372_Probes_61999
GPL14372_Probes_62000
Expression_clusterWBPaper00041207:PP_dauer_up
WBPaper00041466:PP_germline-ablation_regulated
MethodGene